Job Description P77718 Confidence 97.03% Date Thu Jan 5 12:32:03 GMT 2012 Rank 119 Aligned Residues 141 % Identity 16% Template c3ilvA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																																								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	F	V	L	S	L	S	G	G	A	D	S	S	A	C	A	I	X	V	A	E	X	I	R	K	G	L	K	E	L	G	L	T	A	F	L	Q	K	S	N	X	E	T	L	F	D	L	P	A	L	Q	H	L	P	F	E	E	Q	A	K	K	I	T	A	V	F	L	T	T	A	Y	Q	S	T	R	N	S	G	D
Template Known Secondary structure			S							S	S																															T		G	G	G			S	S		S	S		T	T	S																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.													.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	G	E	I	L	E	K	I	D	D	G	Q	M	G	.	.	.	.	.	.	.	.	.	.	.	.	V	I	L	K	R	M	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		E	T	Y	T	S	A	K	T	L	A	E	S	.	.	.	.	I	G	A	T	F	Y	N	W	S	V	D	E	E	I	E	Q	Y	K	A	T	I	E	N	V	I	E	R	P	L	T	W	E	K	D	D	I	T	L	Q	N	I	Q	A	R	G	R	A	P	I	I	W	X	L	T	N	V	K	Q	A	L	L	I	T	T
Template Known Secondary structure														.	.	.	.		T																							T	T	S				T	T	T												T	T												T				B
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		287	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		G	E	.	.	.	.	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D	T	L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.					.	.	.				.	.	.	.	.	.	.
Template Conservation												.	.	.				.	.	.	.	.	.	.
Template Sequence		S	N	R	S	E	G	D	V	G	Y	.	.	.	A	T	X	.	.	.	.	.	.	.	D	G	D	T	A	G	G	I	A	P	I	A	G	V	D	K	D	F	I	R	S	W	L	R	W	A	E
Template Known Secondary structure									T	T		.	.	.	S		T	.	.	.	.	.	.	.	T	T	T	T		S	S	B	B	T	T	T	T	S
Template Predicted Secondary structure												.	.	.				.	.	.	.	.	.	.
Template SS confidence
		458	.	460	.	.	.	.	.	.	.				.	.	470								.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions