Job Description P77718 Confidence 90.71% Date Thu Jan 5 12:32:03 GMT 2012 Rank 123 Aligned Residues 110 % Identity 21% Template c3g8qA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea Resolution 2.40 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		I	E	V	R	A	K	D	E	N	Q	R	L	A	I	R	D	A	L	T	R	I	P	G	I	H	H	I	L	E	V	E	D	V	P	F	T	D	M	H	D	I	F	E	K	A	L	V	Q	Y	R	D	Q	L	E	G	K	T	F	C	V	R	V	K	R	R	G	K	H	D	F	.	S	S	I	D	V	E	R	Y	V
Query Conservation																																																																								.
Alig confidence																																				.	.	.																		.																.
Template Conservation																																				.	.	.																		.
Template Sequence		I	M	V	T	R	G	D	P	D	E	A	V	E	L	L	K	E	E	L	P	V	F	R	I	R	R	F	L	I	S	G	E	F	D	.	.	.	R	D	E	L	R	E	R	I	L	E	D	I	E	P	R	I	L	.	D	P	F	A	V	R	A	R	I	A	R	A	G	A	F	S	S	S	R	E	A	E	V	F	I
Template Known Secondary structure							S													S	T	T	S						S							.	.	.												T	G	G	G			.	S	S											S	S		S	S
Template Predicted Secondary structure																																				.	.	.																		.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	L	N	Q	H	I	E	S	A	R	V	K	L	T	N	P	D	V	T	V	H	L	E	V	E	D	D	R	L	L	L	I	K	G	R
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		G	D	V	L	T	S	V	.	.	G	R	E	V	N	L	N	D	P	R	T	V	V	T	V	D	V	L	G	P	R	V	S	V	G	V	E	K
Template Known Secondary structure							T	T	.	.	T			B		S	S	S		S									T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		243	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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