Job Description P77718 Confidence 99.16% Date Thu Jan 5 12:32:03 GMT 2012 Rank 50 Aligned Residues 188 % Identity 19% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	.	.	.	.	.	.	.	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	G
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		L	R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A	R	R	A	L	A	F	V	.	.	.	.	.	.	.	.	R	A	D	E	T	L	T	V	D	V	K	P	A	A	D
Template Known Secondary structure											S	S																				T	T												S														.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260													.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	L	E	K	I	D	D	G	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	G	V	I	L	K	R	M	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D	T	L	I	L	R	P	L	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.						.
Template Conservation																																																					.	.	.	.	.						.
Template Sequence		A	M	L	A	A	L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	A	V	A	G	A	R	N	G	V	V	I	G	T	D	H	.	.	.	.	.	A	A	E	S	V	.	M	G	F	F	T	K	F	G	D	G	G	A	D	V	L	P	L	A
Template Known Secondary structure										T	T																																T	T				B					.	.	.	.	.						.													S	B		T	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.						.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.					.	.																.																		.
Query SS confidence																		.					.	.																.																		.
Query Sequence		S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G	T	.	E	D	F	A	.	.	R	T	M	P	E	Y	C	G	V	I	S	K	S	P	T	.	V	K	A	V	K	S	K	I	E	A	E	E	E	K	F	D	F	.	S	I	L	D	K	V	V	E	E
Query Conservation																		.					.	.																.																		.
Alig confidence																		.					.	.																.																		.
Template Conservation
Template Sequence		G	L	T	K	R	R	V	R	A	L	A	R	M	L	G	A	D	E	P	L	V	L	K	T	P	T	A	D	L	E	T	L	R	P	Q	R	P	H	A	Y	G	I	T	Y	E	Q	I	D	D	F	L	E	G	K	P	M	D	D	A	V	A	E	T	V	L	R
Template Known Secondary structure		T													T	T							T								G	G	G	S		S																		T		S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions