Return to main results Retrieve Phyre Job Id

Job DescriptionP77718
Confidence97.06%DateThu Jan 5 12:32:03 GMT 2012
Rank118Aligned Residues137
% Identity18%Templatec3dlaD_
PDB info PDB header:ligaseChain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200 .........210.........220.........230.........240.........250...
Predicted Secondary structure 






....
















Query SS confidence 






















. . . .




















































Query Sequence  EDVLSLISGGFDSGVSSYMLMRR. . . . GCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILE
Query Conservation 



 











 

 

....
  
  
 
       
    

   
         
 
 

 
      
  
Alig confidence 






















....
















..........

























Template Conservation     











       
   
      
    

    ..........
  

  

     
 
         
Template Sequence  PKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFNN. . . . . . . . . . AIKLARALGVTFSEIDIGDTARLMLH
Template Known Secondary structure 


SSTT

GGG




..........T


T
Template Predicted Secondary structure 










..........


Template SS confidence 















































































   361........370.........380.........390.........400.... .....410.........420.........430
 
   254.....260 .........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 





..........






















Query SS confidence 






. . . . . . . . . .






























































Query Sequence  KIDDGQM. . . . . . . . . . GVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEH
Query Conservation         .......... 
  

 
 
 
  

   

 















 

  
      






  

 
Alig confidence 






..........


























.....






























Template Conservation               
   

 


 
   
   

  
 


 

.....
 

 
 

 
   

  
  

   
 

 
Template Sequence  TIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTG. . . . . DLSELALGWSTYGVGDQMSHYNVNAGVPKTL
Template Known Secondary structure  TT
GGGGT




T

.....
T
S

SSSTT

SSSTT

Template Predicted Secondary structure 


















.....

















Template SS confidence 















































































   438.440.........450.........460.........470.........480. ........490.........500.........510..
 
   324.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  IINLAR
Query Conservation 

  
 
Alig confidence 





Template Conservation 
  
  
Template Sequence  IQHLIR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   513.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions