Job Description P77718 Confidence 99.88% Date Thu Jan 5 12:32:03 GMT 2012 Rank 8 Aligned Residues 166 % Identity 19% Template c2hmaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae Resolution 2.41 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		T	Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	G	E	I	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																				.	.																									.	.	.	.
Template Conservation																																																				.	.
Template Sequence		S	K	T	R	V	V	V	G	X	S	G	G	V	D	S	S	V	T	A	L	L	L	K	E	Q	G	Y	D	V	I	G	I	F	X	K	N	W	D	D	T	D	C	T	A	T	E	D	Y	K	D	.	.	V	V	A	V	A	D	Q	I	G	I	P	Y	Y	S	V	N	F	E	K	E	Y	W	D	R	V	F	E	Y
Template Known Secondary structure		G	G	S								S	S													T	T																									.	.									T																T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
						252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	L	E	K	I	D	D	G	Q	M	G	V	I	L	K	R	M	M	.	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D	T
Query Conservation		.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																						.
Template Sequence		F	L	A	E	Y	R	A	G	R	T	P	N	P	D	V	X	C	N	K	E	I	K	F	K	A	F	L	D	Y	A	I	T	L	G	A	D	Y	V	A	T	G	H	Y	A	R	V	A	R	D	E	D	G	T	V	H	X	L	R	G	V	D	N	G	K	D	Q	T	Y	.	F	L	S	Q	L	S	Q	E	Q	L	Q
Template Known Secondary structure								T	T													T	T	T	T								T	T	T		S							S							S	S	S								S	S	T	T	T			G	G	.	G	G	T	T							T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G	T	E	D	F	A	.	R	T	M	P	E	Y	C
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		K	T	X	F	P	L	G	H	L	E	K	P	E	V	R	R	L	A	E	E	A	G	L	S	T	A	K	K	K	D	S	T	G	I	C
Template Known Secondary structure		T				T	T	T	T													T	T		T	T	T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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