Job Description P77718 Confidence 99.85% Date Thu Jan 5 12:32:03 GMT 2012 Rank 10 Aligned Residues 176 % Identity 17% Template c2dplA_ PDB info PDB header:ligase Chain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3 Resolution 1.43 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.
Predicted Secondary structure																										.																																															.
Query SS confidence																										.																																															.
Query Sequence		Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	.	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	.	V	V	G	E	I	L	E	K
Query Conservation																										.																																															.
Alig confidence																										.																				.	.	.	.	.																							.
Template Conservation																																														.	.	.	.	.
Template Sequence		D	S	K	A	I	I	A	L	S	G	G	V	D	S	S	T	A	A	V	L	A	H	K	A	I	G	D	R	L	H	A	V	F	V	N	T	G	F	L	R	K	G	E	P	.	.	.	.	.	E	F	V	V	K	T	F	R	D	E	F	G	M	N	L	H	Y	V	D	A	Q	D	R	F	F	S	A	L	K	G	V
Template Known Secondary structure		T	S								S	S															G	G	G									S				T	T			.	.	.	.	.								T	T	T	T																	T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	D	G	Q	M	G	V	I	L	K	R	M	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D	T	L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G	T	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	P	E	E	K	R	K	I	I	G	R	V	F	I	E	V	F	E	E	V	A	K	K	I	G	A	E	Y	L	I	Q	G	T	I	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	L	I	E	P	L	R	D	L	Y	K	D	E	V	R	E	L	A	K	F	L	G	L	P
Template Known Secondary structure																											T		S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T													T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		335	.	.				.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure					.	.	.											.
Query SS confidence					.	.	.											.
Query Sequence		D	F	A	.	.	.	R	T	M	P	E	Y	C	G	V	I	.	S	K	S	P	T	V	K	A	V	K	S	K	I	E	A	E	E	E	K	F	D	F	S	I	L	D
Query Conservation					.	.	.											.
Alig confidence					.	.	.											.
Template Conservation
Template Sequence		E	K	I	Y	N	R	M	P	F	P	G	P	G	L	A	V	R	V	I	G	E	V	T	P	E	K	I	R	I	V	R	E	A	N	A	I	V	E	E	E	V	E	R
Template Known Secondary structure						T						T	T	G	G	G	G	G	B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions