Job Description P77718 Confidence 99.91% Date Thu Jan 5 12:32:03 GMT 2012 Rank 7 Aligned Residues 171 % Identity 18% Template c2derA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna-specific 2-thiouridylase mnma; PDBTitle: cocrystal structure of an rna sulfuration enzyme mnma and2 trna-glu in the initial trna binding state Resolution 3.10 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.																													.	.	.	.	.	.
Query SS confidence																																														.	.																													.	.	.	.	.	.
Query Sequence		Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	.	.	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	.	.	.	.	.	.
Query Conservation																																														.	.																													.	.	.	.	.	.
Alig confidence																																														.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W	D	N	V	F	E
Template Known Secondary structure											S		S	T	T									T	T																S																						T																T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
				249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	E	I	L	E	K	I	D	D	G	Q	M	G	V	I	L	K	R	M	.	.	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D
Query Conservation		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																							.
Template Sequence		L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	.	F	L	Y	T	L	S	H	E	Q	I
Template Known Secondary structure									T	T													T	T	T	T									T	T			S							S							T	T								S	S	T	T	T			G	G	.	G	G	S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G	T	E	D	F	A	R	T	M	P	E	Y	C	G	V	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V	K	F	R	E	F	L	G	R	Y	L	P	A	Q	P
Template Known Secondary structure								G	G	G	S												T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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