Job Description P00956 Confidence 100.00% Date Thu Jan 5 10:57:19 GMT 2012 Rank 30 Aligned Residues 197 % Identity 23% Template c3o0aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:leucyl-trna synthetase subunit alpha; PDBTitle: crystal structure of the wild type cp1 hydrolitic domain from aquifex2 aeolicus leucyl-trna Resolution 1.77 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		R	S	A	L	A	E	A	E	V	E	Y	Y	D	K	T	S	P	S	I	D	V	A	F	Q	A	V	D	Q	D	A	L	K	A	K	F	A	V	S	N	V	N	G	P	I	S	L	V	I	W	T	T	T	P	W	T	L	P	A	N	R	A	I	S	I	A	P	D	F	D	Y	A	L	V	.	.	.	.	.	.	Q
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		E	G	A	L	I	R	F	Y	V	E	I	E	E	P	E	K	F	L	N	C	V	P	E	E	L	K	E	T	L	L	K	E	K	.	.	.	.	.	.	.	.	.	R	I	Y	I	D	V	F	T	T	R	P	D	T	V	F	G	A	T	F	V	V	L	A	P	E	H	P	L	V	P	V	L	A	C	I	G	E	R
Template Known Secondary structure													S		G	G	G	T	G	G	G	S												S	.	.	.	.	.	.	.	.	.									S		G	G	G	G	G	G								T	T		T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	G	Q	A	V	I	L	A	K	D	L	V	E	S	V	M	Q	R	I	G	V	T	D	Y	T	I	L	G	T	V	K	G	A	E	L	E	L	L	R	F	T	H	P	F	M	G	F	D	V	P	A	I	L	G	D	H	V	T	L	D	A	G	T	G	A	V	H	T	A	P	G	H	G	P	D	D	Y	V	I
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		L	G	N	A	C	Y	S	D	V	E	N	F	V	E	K	M	K	K	M	S	T	.	.	R	E	R	T	M	E	E	D	K	E	G	V	F	L	G	V	Y	A	T	N	P	A	N	G	E	K	I	P	V	W	S	A	N	Y	V	L	Y	E	Y	G	T	G	A	I	M	C	V	P	A	H	D	Q	R	D	W	E	F
Template Known Secondary structure			T	S															T	S			.	.					S		S	S													T	T	T										T	T	S		T	T	S	T	T	S						T	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.												.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	K	Y	G	L	E	T	A	N	P	V	G	P	D	G	T	Y	L	P	G	.	.	.	.	.	.	.	.	.	.	.	T	Y	P	T	L	D	G	V	N	V	F	K	A	N	D	I	V	V	A	L	L	Q	E	K	G	A	L	L	H	V	E	K	M
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	K	Y	D	L	P	I	K	V	V	V	K	P	E	G	A	W	D	F	E	K	G	A	Y	E	G	K	G	T	L	V	N	S	D	G	F	D	G	L	D	S	E	T	A	K	R	K	I	T	E	W	L	Q	D	R	G	L	G	E	K	K	V	S	Y
Template Known Secondary structure						T										S	S				T	T	T					S						S		G	G	G	T	T		B															T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions