Job Description P00956 Confidence 95.87% Date Thu Jan 5 10:57:19 GMT 2012 Rank 80 Aligned Residues 166 % Identity 18% Template c3n9iA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from yersinia pestis2 co92 Resolution 1.95 Å

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.							.	.	.	.	.	.	590	.	.	.	.	.	.				.	.	.	600	.	.	.	.	.	.				.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.														.	.	.											.	.	.
Query SS confidence																														.	.	.	.	.	.														.	.	.											.	.	.
Query Sequence		A	D	M	Y	L	E	G	S	D	Q	H	R	G	W	F	M	S	S	L	M	I	S	T	A	M	K	G	K	.	.	.	.	.	.	A	P	Y	R	Q	V	L	T	H	G	F	T	V	.	.	.	D	G	Q	G	R	K	M	S	K	S	.	.	.	I	G	N	T	V	S	P	Q	D	V	M	N	K	L	G	A	D
Query Conservation																														.	.	.	.	.	.														.	.	.											.	.	.
Alig confidence												.																		.	.	.	.	.	.														.	.	.											.	.	.										.	.	.	.	.	.	.	.
Template Conservation												.																																																														.	.	.	.	.	.	.	.
Template Sequence		T	N	Q	V	P	V	G	E	D	Q	.	K	Q	H	L	E	L	S	R	D	I	A	S	R	F	N	N	L	Y	G	D	I	F	K	I	P	E	P	F	I	P	K	A	G	A	R	V	M	S	L	Q	D	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	E	L	L	E	.	.	.	.	.	.	.	.
Template Known Secondary structure			S						G	G	G	.																			S	S		S															B		S	S		T	T	S	B			T	T		S		G	G	G			B	T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																																														.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.				.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		I	L	R	L	W	V	A	S	T	D	Y	T	G	E	M	A	V	S	D	E	I	L	K	R	A	A	D	S	Y	R	R	I	R	N	T	A	R	F	L	L	A	N	L	N	G	F	D	P	A	K	D	M	V	K	P	E	E	M	V	V	L	D	.	.	.	R	W	A	V	G	C	A	K	A	A	Q	E	D	I	L
Query Conservation																																																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	S	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	K	I	K	R	A	M	T	D	S	D	E	P	A	L	I	R	Y	D	V	E	K	K	A	G	V	S	N	L	L	D	I	L	S	G	V	T	G	Q	S	I	P	E	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.				T							S	S							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			224	.	.	.	.	.	230													.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.				.	.	.	.	730	.	.	.	.	.	.	.	.	.					740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.															.	.	.	.
Query SS confidence																											.	.	.															.	.	.	.
Query Sequence		K	A	Y	E	A	Y	D	F	H	E	V	V	Q	R	L	M	R	F	C	S	V	E	M	G	S	.	.	.	F	Y	L	D	I	I	K	D	R	Q	Y	T	A	K	.	.	.	.	A	D	S	V	A	R	R	S	C	Q	T	A	L	Y	H	I	A	E	A	L
Query Conservation																											.	.	.															.	.	.	.
Alig confidence																											.	.	.															.	.	.	.
Template Conservation
Template Sequence		A	Q	F	T	G	Q	M	Y	G	H	L	K	G	A	V	A	D	A	V	S	G	M	L	S	E	L	Q	E	R	Y	R	T	Y	R	E	D	E	A	L	L	Q	D	V	M	R	E	G	A	A	K	A	R	A	R	A	Q	V	T	L	A	K	V	Y	E	A	I
Template Known Secondary structure				T	T	T																														T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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