Job Description P00956 Confidence 95.44% Date Thu Jan 5 10:57:19 GMT 2012 Rank 82 Aligned Residues 173 % Identity 18% Template c2yy5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from mycoplasma2 pneumoniae Resolution 2.55 Å

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.							.	.	.	.	.	.	590	.			.	.	.	.	.	.	.	.			600	.	.	.	.	.	.	.	.	.				610	.	.					.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.									.	.									.	.											.	.	.				.	.	.	.
Query SS confidence																														.	.	.	.	.	.									.	.									.	.											.	.	.				.	.	.	.
Query Sequence		A	D	M	Y	L	E	G	S	D	Q	H	R	G	W	F	M	S	S	L	M	I	S	T	A	M	K	G	K	.	.	.	.	.	.	A	P	Y	R	Q	V	L	T	.	.	H	G	F	T	V	D	G	Q	.	.	G	R	K	M	S	K	S	I	G	N	.	.	.	T	V	S	.	.	.	.	P	Q	D	V	M	N
Query Conservation																														.	.	.	.	.	.									.	.									.	.											.	.	.				.	.	.	.
Alig confidence												.																		.	.	.	.	.	.			.						.	.									.	.											.	.	.				.	.	.	.
Template Conservation												.																										.
Template Sequence		P	D	I	V	P	V	G	N	D	Q	.	K	Q	H	L	E	L	T	R	D	L	A	Q	R	I	Q	K	K	F	K	L	K	L	R	L	P	.	Q	F	V	Q	N	K	D	T	N	R	I	M	D	L	F	D	P	T	K	K	M	S	K	S	S	K	N	Q	N	G	V	I	Y	L	D	D	P	K	E	V	V	V	K
Template Known Secondary structure			S						G	G	G	.																										.						T	T	T	T	T		B		S	S		T	T	S	B			T	T		S		G	G	G			B	T	T
Template Predicted Secondary structure												.																										.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.				.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		K	L	G	A	D	I	L	R	L	W	V	A	S	T	D	Y	T	G	E	M	A	V	S	D	E	I	L	K	R	A	A	D	S	Y	R	R	I	R	N	T	A	R	F	L	L	A	N	L	N	G	F	D	P	A	K	D	.	.	.	M	V	K	P	E	E	M	V	V	L	D	R	W	A	V	G	C	A	K	A	A
Query Conservation																																																										.	.	.
Alig confidence			.	.	.	.	.	.	.																																																	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	I	R	Q	A	T	T	D	S	F	N	K	I	R	F	A	S	K	T	Q	P	G	V	T	N	M	L	T	I	L	K	A	L	L	K	E	P	V	N	Q	S	L	T	N	Q	L	G	N	D	L	E	A	Y	F	S	T	K	S	Y	L	D	L	K	N	A	L	T	E	A	T	V	N	L
Template Known Secondary structure			.	.	.	.	.	.	.								S	S				S			T	T	T															T	T	S	G	G	G									S						T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		224								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	D	I	L	K	A	Y	E	A	Y	D	F	H	E	V	V	Q	R	L	M	R	F	C	S	V	E	M	G	S	F	Y	L	D	I	I	K	D	R	Q	Y	T	A	K	A	D	S	V	A	R	R	S	C	Q	T	A	L	Y	H	I	A	E	A	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	I	Q	R	K	R	E	Q	I	S	R	E	Q	V	F	N	C	L	Q	A	G	K	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	A	T	A	R	T	T	L	A	L	F	Y	D	G	F
Template Known Secondary structure											T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.																							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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