Job Description P00956 Confidence 100.00% Date Thu Jan 5 10:57:19 GMT 2012 Rank 31 Aligned Residues 192 % Identity 18% Template c2wfdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:leucyl-trna synthetase, cytoplasmic; PDBTitle: structure of the human cytosolic leucyl-trna synthetase2 editing domain Resolution 3.25 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		T	S	P	S	I	D	V	A	F	Q	A	V	D	Q	D	A	L	K	A	K	F	A	V	S	N	V	N	G	P	I	S	L	V	I	W	T	T	T	P	W	T	L	P	A	N	R	A	I	S	I	A	P	D	F	D	Y	A	L	V	Q	I	.	D	G	Q	A	V	I	L	A	K	D	L	V	E	S	V	M	Q	R
Query Conservation																																																															.
Alig confidence																											.																																				.
Template Conservation																											.
Template Sequence		X	G	P	Q	E	Y	T	L	L	K	L	K	V	L	E	P	Y	P	S	K	L	S	G	L	K	.	G	K	N	I	F	L	V	A	A	T	L	R	P	E	T	X	F	G	Q	T	N	C	W	V	R	P	D	X	K	Y	I	G	F	E	T	V	N	G	D	I	F	I	C	T	Q	K	A	A	R	N	X	S	Y	Q
Template Known Secondary structure																S	S			G	G	G	G	G	G	T	.	T	S									S		G	G	G	G	G	G								S	S	S								T	T	S															T	T
Template Predicted Secondary structure																											.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		285	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.											.	.	.	.	.	.	350
Predicted Secondary structure					.	.	.																										.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																										.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	V	.	.	.	T	D	Y	T	I	L	G	T	V	K	G	A	E	L	E	L	L	R	F	T	H	P	F	M	G	.	F	D	V	P	A	I	L	G	D	H	V	T	L	D	A	G	T	G	A	V	H	T	A	P	G	H	G	P	D	D	Y	.	.	.	.	.	.	.	.	.	.	V	I	G	Q	K	Y	G
Query Conservation					.	.	.																										.																																.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																										.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	T	K	D	N	G	V	V	P	V	V	K	E	L	X	G	E	E	I	L	G	A	S	L	S	A	P	L	T	S	Y	K	V	I	Y	V	L	P	X	L	T	I	K	E	D	K	G	T	G	V	V	T	S	V	P	S	D	S	P	D	D	I	A	A	L	R	D	L	K	K	K	Q	A	L	R	A	K	Y	G
Template Known Secondary structure		T	S	S	S	S	T	T										S	G	G	G	T	T						S	S		S	S	S								S				S	S	S	S		S	S					T	T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																																													.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	A	N	P	V	G	P	D	G	T	Y	L	P	G	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	L	D	G	V	N	V	F	K	A	N	D	I	V	V	A	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	D	D	X	V	L	P	F	E	P	V	P	V	I	E	I	P	G	F	G	N	L	S	A	V	T	I	C	D	E	L	K	I	Q	S	Q	N	D	R	E	K	L	A	E	A	K	E	K	I	Y	L	K	G	F	Y	E	G	I	X	L	V	D	G	F	K	G	Q	K	V	Q	D	V	K	K	T	I	Q	K	K
Template Known Secondary structure				G	G	G	T	T	T									B	T	T	T	B	S	S									T	T			S	T	T																								S	T	T	S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	K	G	A	L	L	H	V	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	I	D	A	G	D	A	L	I	Y	X	E
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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