Job Description P00956 Confidence 97.36% Date Thu Jan 5 10:57:19 GMT 2012 Rank 68 Aligned Residues 139 % Identity 19% Template c2j5bA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol Resolution 2.20 Å

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		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600			.	.	.	.	.	.	.	.	.		610	.					.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.										.			.	.	.	.
Query SS confidence																																															.	.										.			.	.	.	.
Query Sequence		A	D	M	Y	L	E	G	S	D	Q	H	R	G	W	F	M	S	S	L	M	I	S	T	A	M	K	G	K	A	P	Y	R	Q	V	L	T	H	G	F	T	V	D	G	Q	G	.	.	R	K	M	S	K	S	I	G	N	.	T	V	.	.	.	.	S	P	Q	D	V	M	N	K	L	G	A	D	I	L	R	L	W
Query Conservation																																															.	.										.			.	.	.	.
Alig confidence												.																				.	.														.	.										.			.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation												.																				.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		I	D	I	C	Q	L	G	I	D	Q	.	R	K	V	N	M	L	A	I	E	Y	A	N	D	R	G	L	K	I	P	.	.	I	S	L	S	H	H	M	L	M	S	L	S	G	P	K	K	K	M	S	K	S	D	P	Q	G	A	I	F	M	D	D	T	E	Q	E	V	S	E	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S					B	G	G	G	.														T	T					.	.					B						T	T		S	S				S	T	T		G	G	G	S		B	T	T										.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																				.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.												.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	S	T	D	Y	T	G	E	M	A	V	S	D	E	I	L	K	R	A	A	D	S	Y	R	R	I	R	N	T	A	R	F	L	L	A	N	L	N	G	F	D	P	A	K	D	M	V	.	.	.	.	.	.	.	.	.	.	.	K	P	E	E	M	V	V	L	D	R	W	A	V	G	C	A	K	A	A	Q	E
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	R	A	Y	C	T	D	E	T	F	D	N	P	.	.	.	.	.	.	.	.	.	.	.	.	I	F	E	Y	I	K	Y	L	L	L	R	W	F	G	T	L	N	L	C	G	K	I	Y	T	D	I	E	S	I	Q	E	D	F	S	S	M	N	K	R	E	L	K	T	D	V	A	N	Y	I	N	T	I	I	D
Template Known Secondary structure					S				S	S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.								T						S					T	T				S	S									T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	L	K	A	Y	E	A	Y	D	F	H	E	V	V	Q	R	L	M	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	E	H	F	K	K	P	E	L	S	E	L	L	S	N	V	K	S	Y
Template Known Secondary structure							T	T	S	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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