Job Description P0A932 Confidence 100.00% Date Thu Jan 5 11:09:16 GMT 2012 Rank 2 Aligned Residues 322 % Identity 76% Template c2w8iG_ PDB info PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. Resolution 2.99 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	Q	N	L	S	T	S	N	K	D	V	I	E	L	P	D	N	Q	Y	D	L	D	K	M	V	N	I	Y	P	V	T	P	G	L	I	D	Q	L	R	A	K	P	I	M	S	Q	A	N	P	E	L	E	Q	Q	I	A	N	Y	E	Y	R	I	G	I	G	D	V	L	M	V	T	V	W	D	H	P	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	G	Q	G	L	N	S	L	R	K	N	V	V	E	L	P	D	S	D	Y	D	L	D	K	L	V	N	V	Y	P	M	T	P	G	L	I	D	Q	L	R	P	E	P	V	I	A	R	S	N	P	Q	L	D	N	L	L	K	S	Y	E	Y	R	I	G	V	G	D	V	L	M	V	T	V	W	D	H	P	E	L
Template Known Secondary structure				S						S	S	S						T	T	T	T			G	G	G	S															S							B											S							T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	P	A	G	Q	Y	R	S	A	S	D	T	G	N	W	V	N	A	D	G	A	I	F	Y	P	Y	I	G	R	L	K	V	A	G	K	T	L	T	Q	V	R	N	E	I	T	A	R	L	D	S	V	I	E	S	P	Q	V	D	V	S	V	A	A	F	R	S	Q	K	A	Y	V	T	G	E	V	S	K	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	P	A	G	Q	Y	R	S	A	S	D	T	G	N	W	V	N	S	D	G	T	I	F	Y	P	Y	I	G	K	V	Q	V	A	G	K	T	V	S	Q	V	R	Q	D	I	T	S	R	L	T	T	Y	I	E	S	P	Q	V	D	V	S	I	A	A	F	R	S	Q	K	V	Y	V	T	G	E	V	A	N	S	G
Template Known Secondary structure				T	T		S	S	S		G	G	G	S	S					T	T	S					T	T	T						T	T															T	T	T	S	S	S												S								S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	P	I	T	N	I	P	L	T	I	M	D	A	I	N	A	A	G	G	L	T	A	D	A	D	W	R	N	V	V	L	T	Q	N	G	V	K	T	K	V	N	L	Y	A	L	M	Q	R	G	D	L	R	Q	N	K	L	L	H	P	G	D	I	L	F	I	P	R	N	D	D	L	K	V	F	V	M	G	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	A	I	T	N	I	P	L	T	V	M	D	A	I	N	A	A	G	G	L	A	A	D	A	D	W	R	N	V	V	L	T	H	N	G	K	D	T	K	I	S	L	Y	A	L	M	Q	K	G	D	L	T	Q	N	H	L	L	Y	H	G	D	I	L	F	I	P	S	N	D	D	L	K	V	F	V	M	G	E	V
Template Known Secondary structure							S	S			B								T	T	S	B		T	T	B		G	G	G						S	S												T	T		B	G	G	G			B			T	T							B	G	G	G								S	B
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Q	S	T	L	K	M	D	R	S	G	M	T	L	A	E	A	L	G	N	A	E	G	M	N	Q	D	V	A	D	A	T	G	I	F	V	I	R	A	T	Q	N	K	Q	N	G	K	I	A	N	I	Y	Q	L	N	A	K	D	A	S	A	M	I	L	G	T	E	F	Q	L	E	P	Y	D	I	V	Y	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	Q	S	T	L	K	M	D	R	S	G	M	T	L	A	E	A	L	G	N	A	E	G	I	S	Q	E	M	S	D	A	T	G	I	F	V	V	R	Q	L	K	G	D	R	T	G	K	I	A	D	I	Y	Q	L	N	A	Q	D	A	S	A	M	V	L	G	T	E	F	Q	L	Q	P	Y	D	I	V	Y	V	T
Template Known Secondary structure		S	S							B	T	T	B		B								T	T	S	B		T	T	T														S		S	S	S										T	T	S	T	T	G	G	G	G	G	G	S		B			T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		344	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		344	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions