Job Description P08506 Confidence 99.02% Date Wed Jan 25 15:20:14 GMT 2012 Rank 63 Aligned Residues 221 % Identity 22% Template d1yqsa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.05

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	A	R	A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation												.	.	.																																																									.	.	.	.	.	.
Template Sequence		A	P	G	A	M	V	R	V	D	D	.	.	.	N	G	T	I	H	Q	L	S	E	G	V	A	D	R	A	T	G	R	A	I	T	T	T	D	R	F	R	V	G	S	V	T	K	S	F	S	A	V	V	L	L	Q	L	V	D	E	G	K	L	D	L	D	A	S	V	N	.	.	.	.	.	.	T	Y	L	P	G
Template Known Secondary structure			S									.	.	.	T	T									B	S		T	T	T			B			T	T		B				G	G	G															T	T	S			T	T	S	B			.	.	.	.	.	.			S	T	T
Template Predicted Secondary structure												.	.	.																																																									.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																																																		.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	L	P	D	D	R	I	T	V	R	Q	V	M	S	H	R	.	.	.	S	G	L	Y	D	Y	T	N	D	M	F	A	Q	T	V	P	G	F	E	S	V	R	N	K	V	F	S	Y	Q	D	L	I	T	L	S	L	K	H	G	V	T	N	A	P	G	A	A	Y	S	Y	S	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S	S		T	T		B						T	T		.	.	.	S					T					T	S	S									T	T														T	S			S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
											94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		135	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																																.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	C	I	A	L	A	D	Y	V	.	.	.	.	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	L	D	A	P	G
Query Conservation												.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.											.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		T	N	F	V	V	A	G	M	L	I	E	K	L	T	G	H	S	V	A	T	E	Y	Q	N	.	.	R	I	F	T	P	L	N	L	T	D	T	F	Y	V	H	P	D	T	V	I	P	G	T	H	A	N	G	Y	L	T	P	D	E	A	G	G	A	L	V	D	S	T	E	Q	T	V	S	W	A	Q	S	A	G	A
Template Known Secondary structure																S	S									.	.		T	T	T	T	T	T		T	T		B			T	T						S	S	B								S	S	T	T												T	T	T	G	G	G	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H	D	.	.	.	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	G	D	M	R
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																												.	.
Template Conservation																																																																		.	.
Template Sequence		V	I	S	S	T	Q	D	L	D	T	F	F	S	A	L	M	S	G	Q	L	M	S	A	A	Q	L	A	Q	M	Q	Q	W	T	T	V	N	S	T	Q	G	Y	G	L	G	L	R	R	R	D	L	S	C	G	I	S	V	Y	G	H	T	G	T	V	Q	.	.	G	Y	Y	T	Y	A	F	A	S	K	D	G	K	R
Template Known Secondary structure																		T	T		S	S									T							T	T					S	S							T	T	S											T	.	.	T									T	T	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	V	V	L	G	A	K	T	D	R	I	R	F	N	E	S	E	K	L	L	T	W	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	T	A	L	A	N	T	S	N	N	V	N	V	L	N	T	M	A	R	T	L	E	S	A	F
Template Known Secondary structure								S			S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions