Job Description P08506 Confidence 99.56% Date Wed Jan 25 15:20:14 GMT 2012 Rank 49 Aligned Residues 210 % Identity 15% Template d1nrfa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.50

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	.	.	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q
Query Conservation																	.	.
Alig confidence																	.	.																									.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		G	F	V	L	F	N	S	N	R	K	K	Y	T	I	Y	N	R	K	E	S	T	S	R	F	A	P	A	S	T	Y	K	V	F	S	A	L	L	A	L	E	S	.	.	.	G	I	I	T	K	N	D	S	H	M	T	W	D	G	T	Q	Y	P	Y	K	E	W	N	Q	D	Q	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T	T												S		B			G	G	G	G												.	.	.	T	S	S		S	S				B								S	S	T	T	T	S	S		B		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	.	V	H	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H	D
Query Conservation																																																							.
Alig confidence		.	.	.	.	.	.																						.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	F	S	A	M	S	S	S	T	T	W	Y	F	Q	K	L	D	R	Q	I	G	.	.	.	.	.	.	E	D	H	L	R	H	Y	L	K	S	I	H	Y	G	N	E	D	F	S	V	P	A	D	Y	W	L	D	G	S	L	Q	I	S	P	L	E	Q	V	N	I	L	K	K	F	Y	D	N
Template Known Secondary structure		.	.	.	.	.	.								T														.	.	.	.	.	.											T	T		T	T				S		T	T	T	T	T	T	S	S	S	S		B															T
Template Predicted Secondary structure		.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
								443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.							.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
						198	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.											.	.																																							.	.	.	.
Query SS confidence		.	.	.	.											.	.																																							.	.	.	.
Query Sequence		.	.	.	.	V	P	E	E	Y	A	I	H	K	E	.	.	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	.	.	.	.	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L	G	A	K	T	D
Query Conservation		.	.	.	.											.	.																																							.	.	.	.
Alig confidence		.	.	.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	D	F	K	Q	S	N	I	E	T	V	K	D	S	I	R	L	E	E	S	N	G	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	T	G	T	S	V	I	N	G	E	L	H	A	G	W	F	I	G	Y	V	E	T	A	D	N	T	F	F	F	A	V	H	I	Q	G	E	K
Template Known Secondary structure		T	T																				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S													S	S												S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.																.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	F	N	E	S	E	K	L	L	T	W	G	F	R	F	F	E	T	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	G	S	S	A	A	E	I	A	L	S	I	L	D	K	K	G	I	Y	P
Template Known Secondary structure		S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions