Job Description P08506 Confidence 98.81% Date Wed Jan 25 15:20:14 GMT 2012 Rank 79 Aligned Residues 205 % Identity 14% Template d1m6ka_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.50

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	.	.	.	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D
Query Conservation																			.	.	.
Alig confidence																			.	.	.																			.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		C	F	L	L	Y	D	A	S	T	N	A	E	I	A	Q	F	N	K	A	K	C	A	T	Q	M	A	P	D	S	T	F	I	A	L	S	L	M	A	.	.	.	.	F	D	A	E	I	I	D	Q	K	T	I	F	K	W	D	K	T	P	K	G	M	E	I	W	N	S	N	H	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T													T			B			G	G	G									.	.	.	.			T	T	S			T	T			B				S	S			S	S	G	G	G	S	S		B		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		Q	V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	A	.	.	.	.	.	.	.	P	G	Q	F	S	T	A	R	D	M	A	L	L
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	K	T	W	M	Q	F	S	V	V	W	V	S	Q	E	I	T	Q	K	I	G	.	.	.	.	.	.	L	N	K	I	K	N	Y	L	K	D	F	D	Y	G	N	Q	D	F	S	G	D	E	R	N	N	G	L	T	E	A	W	L	E	S	S	L	K	I	S	P	E	E	Q	I	Q	F
Template Known Secondary structure		.	.	.	.	.	.	.							T	T														.	.	.	.	.	.												T		T	T															T	T	S	S	S	S			B
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
									108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.
Predicted Secondary structure																																																						.	.	.	.	.															.							.	.
Query SS confidence																																																						.	.	.	.	.															.							.	.
Query Sequence		G	K	A	L	I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	.	.	.	.	.	G	Y	N	L	V	A	S	A	T	Q	G	D	M	R	.	L	I	S	V	V	L	.	.
Query Conservation																																																						.	.	.	.	.															.							.	.
Alig confidence																															.	.	.	.	.	.	.	.																.	.	.	.	.															.							.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		L	R	K	I	I	N	H	N	L	P	V	K	N	S	A	I	E	N	T	I	E	N	M	Y	L	Q	D	L	D	.	.	.	.	.	.	.	.	N	S	T	K	L	Y	G	K	T	G	A	G	F	T	A	N	R	T	L	Q	N	G	W	F	E	G	F	I	I	S	K	S	G	H	K	Y	V	F	V	S	A	L	T
Template Known Secondary structure							T	T		S	S	S											T	T						T	.	.	.	.	.	.	.	.	T	S													T	T	S	S													T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
				263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	A	K	T	D	R	I	R	F	N	E	S	E	K	L	L	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	N	L	G	S	N	L	T	S	S	I	K	A	K	K	N	A	I	T
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions