Job Description P08506 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 14 Aligned Residues 233 % Identity 16% Template d1m40a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 0.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S
Query Conservation
Alig confidence																																																														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		G	Y	I	E	L	D	L	N	S	G	K	I	L	E	S	F	R	P	E	E	R	F	P	M	M	S	T	F	K	V	L	L	C	G	A	V	L	S	R	V	D	A	G	Q	E	Q	L	G	R	R	I	H	Y	S	Q	N	D	L	V	E	.	.	.	.	.	.	Y	S	P	V	T	E	K	H	L	T	D	G	M	T
Template Known Secondary structure								T	T	T								S	T	T	S					G	G	G															T	T	S			T	T							G	G	G			S	.	.	.	.	.	.			T	T	G	G	G		T	T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	.	.	.	.	.	.	T	V	H	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		V	R	E	L	C	S	A	A	I	T	M	S	D	N	T	A	A	N	L	L	L	T	T	I	G	G	.	.	.	.	.	P	K	E	L	T	A	F	L	H	N	M	G	D	H	V	T	R	L	D	R	W	E	P	E	L	N	E	A	I	P	N	D	E	R	D	T	T	T	P	A	A	M	A	T	T	L	R	K	L
Template Known Secondary structure												S														T	S	.	.	.	.	.											T	T		S	S							T	T	G	G	G				T	T			T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.
Predicted Secondary structure																																						.																																	.	.	.	.
Query SS confidence																																						.																																	.	.	.	.
Query Sequence		I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	.	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L	.	.	.	.	G	A	K	T	D	R	I
Query Conservation																																						.																																	.	.	.	.
Alig confidence					.																																	.																																	.	.	.	.
Template Conservation					.
Template Sequence		L	T	G	.	E	L	L	T	L	A	S	R	Q	Q	L	I	D	W	M	E	A	D	K	V	A	G	P	L	L	R	S	A	L	P	A	G	W	F	I	A	D	K	S	G	A	G	E	R	G	S	R	G	I	I	A	A	L	G	P	D	G	K	P	S	R	I	V	V	I	Y	T	T	G	S	Q	A	T	M	D	E
Template Known Secondary structure				S	.	T	T	S																S	S		T	T	T	G	G	G	G			T	T											S	T	T										S	T	T												S
Template Predicted Secondary structure					.
Template SS confidence
		194	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	E	S	E	K	L	L	T	W	G	F	R	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	Q	I	A	E	I	G	A	S	L	I	K	H	W
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions