Job Description P08506 Confidence 99.12% Date Wed Jan 25 15:20:14 GMT 2012 Rank 58 Aligned Residues 182 % Identity 19% Template d1k55a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.39

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	.	.	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q
Query Conservation																		.	.
Alig confidence																		.	.																			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	V	L	C	K	S	S	S	K	S	C	A	T	N	D	L	A	R	A	S	K	E	Y	L	P	A	S	T	F	I	P	N	A	I	I	.	.	.	.	G	L	E	T	G	V	I	K	N	E	H	Q	V	F	.	.	.	.	.	.	.	.	.	.	.	K	W	D	G	K	P	R	A	M	K	Q	W	E	R	D
Template Known Secondary structure								S	S	T	T	S				S						T			B			G	G	G								.	.	.	.				T	T	S	S		S	T	T				.	.	.	.	.	.	.	.	.	.	.				S				S	S	G	G	G	S	S
Template Predicted Secondary structure																																						.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	A	.	.	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H
Query Conservation																																																													.	.
Alig confidence								.	.	.	.																		.	.	.	.	.	.																											.	.
Template Conservation								.	.	.	.																		.	.	.	.	.	.
Template Sequence		L	T	L	R	G	A	.	.	.	.	I	Q	V	S	A	V	P	V	F	Q	Q	I	A	R	E	V	G	.	.	.	.	.	.	E	V	R	M	Q	K	Y	L	K	K	F	S	Y	G	N	Q	N	I	S	G	G	I	D	K	F	W	L	E	G	Q	L	R	I	S	A	V	N	Q	V	E	F	L	E	S	L	Y	L
Template Known Secondary structure								.	.	.	.			T	T														.	.	.	.	.	.											T	T		T	T					S		T	T	T	T	T	T	T	S	S			B														T
Template Predicted Secondary structure								.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		197					.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure			.	.	.	.											.	.																																							.	.	.	.	.	.
Query SS confidence			.	.	.	.											.	.																																							.	.	.	.	.	.
Query Sequence		D	.	.	.	.	V	P	E	E	Y	A	I	H	K	E	.	.	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	.	.	.	.	.	.	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L
Query Conservation			.	.	.	.											.	.																																							.	.	.	.	.	.
Alig confidence			.	.	.	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	L	S	A	S	K	E	N	Q	L	I	V	K	E	A	L	V	T	E	A	A	P	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	S	K	T	G	F	S	G	V	G	T	E	S	N	P	G	V	A	W	W	V	G	W	V	E	K	E	T	E	V	Y	F	F	A	F	N
Template Known Secondary structure		T		S	S	S												T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S													T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions