Job Description P08506 Confidence 99.30% Date Wed Jan 25 15:20:14 GMT 2012 Rank 53 Aligned Residues 203 % Identity 14% Template d1k38a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.50

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	.	.	.	.	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																		.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		T	I	V	V	A	D	E	R	Q	A	D	R	A	M	L	V	F	D	P	V	R	S	K	K	R	Y	S	P	A	S	T	F	I	P	H	T	L	F	.	.	.	.	A	L	D	A	G	A	V	R	D	E	F	Q	I	F	R	W	D	G	V	N	R	G	F	A	G	H	N	Q	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S	S							S					T			B			G	G	G								.	.	.	.					T	S			S	T	T			B				S				S		T	T	T	S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H
Query Conservation
Alig confidence		.	.							.	.	.	.																		.	.	.	.	.	.
Template Conservation		.	.							.	.	.	.																		.	.	.	.	.	.
Template Sequence		.	.	Q	D	L	R	S	A	.	.	.	.	M	R	N	S	T	V	W	V	Y	E	L	F	A	K	E	I	G	.	.	.	.	.	.	D	D	K	A	R	R	Y	L	K	K	I	D	Y	G	N	A	D	P	S	T	G	D	Y	W	I	E	G	S	L	A	I	S	A	Q	E	Q	I	A	F	L	R	K	L	Y	R
Template Known Secondary structure		.	.	B						.	.	.	.			T	T														.	.	.	.	.	.											T	T		T	T								T	T	T	T	S	S			B														T
Template Predicted Secondary structure		.	.							.	.	.	.																		.	.	.	.	.	.
Template SS confidence
				106	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		197					.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.											.	.																																																			.
Query SS confidence			.	.	.	.											.	.																																																			.
Query Sequence		D	.	.	.	.	V	P	E	E	Y	A	I	H	K	E	.	.	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	G	D	M	R	L	.	I	S	V	V	L	G	A	K	T	D	R	I
Query Conservation			.	.	.	.											.	.																																																			.
Alig confidence			.	.	.	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.														.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		N	E	L	P	F	R	V	E	H	Q	R	L	V	K	D	L	M	I	V	E	A	G	R	N	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	K	T	G	W	E	G	R	M	G	.	W	W	V	G	W	V	E	W	P	T	G	S	V	F	F	A	L	N	I	D	T	P	N	R	M	D
Template Known Secondary structure		T		S	S	S												T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S			.									T	T												T	T	G	G	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	E	S	E	K	L	L	T	W	G	F	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	F	K	R	E	A	I	V	R	A	I	L	R	S
Template Known Secondary structure		G	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions