Job Description P08506 Confidence 99.96% Date Wed Jan 25 15:20:14 GMT 2012 Rank 41 Aligned Residues 236 % Identity 17% Template d1e25a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.9

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S
Query Conservation
Alig confidence													.																																																							.	.
Template Conservation													.																																																							.	.
Template Sequence		G	V	A	V	W	G	P	D	D	L	E	.	P	L	L	I	N	P	F	E	K	F	P	M	Q	S	V	F	K	L	H	L	A	M	L	V	L	H	Q	V	D	Q	G	K	L	D	L	N	Q	T	V	I	V	N	R	A	K	V	L	Q	N	T	W	A	P	I	.	.	M	K	A	Y	Q	G	D	E	F	S	V	P
Template Known Secondary structure								T	T		S	S	.					S	T	T						G	G	G															T	T	S	S		T	T							T	T	T	S			S	S			T		.	.				S		S	S
Template Predicted Secondary structure													.																																																							.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	.	.	.	.	.	.	T	V	H	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		V	Q	Q	L	L	Q	Y	S	V	S	H	S	D	N	V	A	C	D	L	L	F	E	L	V	G	G	.	.	.	.	.	P	A	A	L	H	D	Y	I	Q	S	M	G	I	K	E	T	A	V	V	A	N	E	A	Q	M	H	A	D	D	Q	V	Q	Y	Q	N	W	T	S	M	K	G	A	A	E	I	L	K	K	F
Template Known Secondary structure																										T		.	.	.	.	.											T	T			S	B													T	T	G	G	G	G	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.				.	.
Predicted Secondary structure																																							.																						.	.	.	.	.	.											.	.	.
Query SS confidence																																							.																						.	.	.	.	.	.											.	.	.
Query Sequence		I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	.	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	.	.	.	.	.	.	G	D	M	R	L	I	S	V	V	L	.	.	.	G	A
Query Conservation																																							.																						.	.	.	.	.	.											.	.	.
Alig confidence					.																																		.																						.	.	.	.	.	.											.	.	.
Template Conservation					.
Template Sequence		E	Q	K	.	T	Q	L	S	E	T	S	Q	A	L	L	W	K	W	M	V	E	T	T	T	G	P	E	R	L	K	G	L	L	P	A	G	T	V	V	A	H	K	T	G	T	S	Q	I	K	A	G	K	T	A	A	T	N	D	L	G	I	I	L	L	P	D	G	R	P	L	L	V	A	V	F	V	K	D	S	A
Template Known Secondary structure			T	T	.		S	S														S			S		T	T	S	T	T	T	T	S		T	T														T	T														T	T	S
Template Predicted Secondary structure					.
Template SS confidence
		194	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		265	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		K	T	D	R	I	R	F	N	E	.	.	.	.	S	E	K	L	L	T	W	G	F	R	F	F
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		E	S	S	R	T	N	E	A	I	I	A	Q	V	A	Q	T	A	Y	Q	F	E	L	K	K	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions