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Job DescriptionP08506
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank18Aligned Residues235
% Identity15%Templated1dy6a_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  AWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVS
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Template Sequence  GVFAIDTGSGNTF. GYRSDERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESR. . . . . . DLEYHSPITTKYKGSGMT
Template Known Secondary structure  TTT

.STTS

GGGGTTSS
TT


TT
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S

TTTT
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   45....50....... ..60.........70.........80.........90......... 100.........110.......
 
   121........130.........140.........150.........160.........170 .........180.........190....
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Query Sequence  VADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQ. . . . . . TVHGLDAPGQFSTARDMALLGKAL
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Template Sequence  LGDMASAALQYSDNGATNIIMERFLG. . . . GPEGMTKFMRSIGDNEFRLDRWELELNTAIPGDKRDTSTPKAVANSLNKL
Template Known Secondary structure  S

TS
....TT
SS



S
TTGGGG

TT

TT
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   119120.........130.........140.... .....150.........160.........170.........180.........190....
 
   195....200.........210.........220.........230.........240... ......250.. .......260.. .......
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Query Sequence  IHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAG. YNLVASATQ. GDMRLISVVL. . . GAKTDRI
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Template Sequence  ALGNVLNAKVKAIYQNWLKGNTTGDARIRASVPADWVVGDKTGSCGAYGTANDYAVIWPKNRAPLIVSIYTTRKSKDDKH
Template Known Secondary structure  TSSSS
T
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TTTGGGGS
TTS
SSTT

TTS

SSTT


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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   270.........280......
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Query Sequence  RFNESEKLLTWGFRFFE
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Template Sequence  SDKTIAEASRIAIQAID
Template Known Secondary structure 
T
Template Predicted Secondary structure 
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   275....280.........290.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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