Job Description P08506 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 30 Aligned Residues 236 % Identity 14% Template d1bsga_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.85

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S
Query Conservation
Alig confidence															.																																																		.	.
Template Conservation															.																																																		.	.
Template Sequence		G	V	Y	A	Y	D	T	G	S	G	R	T	V	.	A	Y	R	A	D	E	L	F	P	M	C	S	V	F	K	T	L	S	S	A	A	V	L	R	D	L	D	R	N	G	E	F	L	S	R	R	I	L	Y	T	Q	D	D	V	E	Q	A	D	G	.	.	A	P	E	T	G	K	P	Q	N	L	A	N	G	M	T
Template Known Secondary structure								T	T	T					.			S	T	T	S					G	G	G	G												T		S	S	S	T	T	T	T														T		.	.		T	T	T	T	S
Template Predicted Secondary structure															.																																																		.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	.	.	.	.	.	.	T	V	H	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		V	E	E	L	C	E	V	S	I	T	A	S	D	N	C	A	A	N	L	M	L	R	E	L	G	G	P	.	.	.	.	.	A	A	V	T	R	F	V	R	S	L	G	D	R	V	T	R	L	D	R	W	E	P	E	L	N	S	A	E	P	G	R	V	T	D	T	T	S	P	R	A	I	T	R	T	Y	G	R	L
Template Known Secondary structure												S														T	S	T	.	.	.	.	.										T	T		S	S					S		T	T	G	G	G				T	T			T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																																							.																						.											.	.	.
Query SS confidence																																							.																						.											.	.	.
Query Sequence		I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	.	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	.	G	D	M	R	L	I	S	V	V	L	.	.	.	G	A	K	T	D	R	I
Query Conservation																																							.																						.											.	.	.
Alig confidence					.																																		.																						.											.	.	.
Template Conservation					.
Template Sequence		V	L	G	.	D	A	L	N	P	R	D	R	R	L	L	T	S	W	L	L	A	N	T	T	S	G	D	R	F	R	A	G	L	P	D	D	W	T	L	G	D	K	T	G	A	G	R	Y	G	T	N	N	D	A	G	V	T	W	P	P	G	R	A	P	I	V	L	T	V	L	T	A	K	T	E	Q	D	A	A	R
Template Known Secondary structure			T	S	.	S	S	S														T			S		T	T	T					S		T	T	S										S	T	T											T	T	S												S	S	T	T
Template Predicted Secondary structure					.
Template SS confidence
		194	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	E	S	E	K	L	L	T	W	G	F	R	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	G	L	V	A	D	A	A	R	V	L	A	E	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions