Job Description P08506 Confidence 98.91% Date Wed Jan 25 15:20:14 GMT 2012 Rank 73 Aligned Residues 197 % Identity 25% Template c3ue3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:septum formation, penicillin binding protein 3, PDBTitle: crystal structure of acinetobacter baumanni pbp3 Resolution 2.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.																							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																														.	.	.
Template Sequence		T	A	I	A	V	D	V	K	T	G	E	I	L	A	M	T	S	W	P	S	Y	N	P	N	D	K	G	G	L	S	N	K	D	A	M	R	N	R	G	A	I	D	M	F	E	P	G	S	T	M	K	P	F	T	V	A	A	A	L	E	.	.	.	S	G	Q	Y	T	P	N	S	I	V	N	T	A	P	G	T	M
Template Known Secondary structure								T	T	T		B								S				T	T			S	S							S	S								B			G	G	G	G											.	.	.	T	T	S			T	T						T	T	S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	A	P
Query Conservation
Alig confidence																.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template Conservation																.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template Sequence		R	L	G	W	H	T	I	R	D	T	H	N	Y	G	.	.	.	.	.	A	L	T	L	T	G	I	.	.	.	.	I	V	K	S	S	N	V	G	S	A	K	L	A	L	S	L	P	.	.	.	.	.	.	K	E	A	L	P	S	F	F	R	R	A	G	F	G	Q	.	.	.	.	.	S	S	D	V	K	F	P
Template Known Secondary structure				T	T						S	S				.	.	.	.	.								.	.	.	.				T												S		.	.	.	.	.	.	T	T									T	T	T	T	S	.	.	.	.	.			T	T			T
Template Predicted Secondary structure																.	.	.	.	.								.	.	.	.																		.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.						380	.	.	.	.	.	.					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.							.	.	.	.	.	.	410	.	.	.	.	.	.	.	.						.	420	.	.	.	.	.
		179																										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		G	E	S	A	G	L	L	Y	S	A	D	K	L	N	S	S	Q	L	G	T	M	A	Y	G	Y	G	L	N	A	T	I	L	Q	L	A	Q	G	Y	A	M	L	A	N	H	.	G	V	E	M	P	L	S	L	H	K	L	D	Q	V	P	E	G	R	Q	V	L	D	P	K	I	A	D	Q	V	L	M	M	L	E	Q
Template Known Secondary structure		T					B				G	G	G										T	T	T		S	S	B	B													T	T	T	.	T						B	S	B			S	S								S
Template Predicted Secondary structure																																														.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
							219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.													.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	N	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L
Query Conservation		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		V	T	L	P	G	G	T	A	K	Q	A	V	I	P	G	Y	R	V	.	G	G	K	T	G	T	A	H	K	L	R	A	D	R	K	G	Y	S	N	S	E	Y	R	A	L	F	A	G	V	A	P	V	S	D	P	R	L	A	M	I	V	V
Template Known Secondary structure			T	S	T	T		S		G	G	G		B	T	T	B			.												T	T		S	S			S	S	S											T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions