Return to main results Retrieve Phyre Job Id

Job DescriptionP08506
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank23Aligned Residues230
% Identity15%Templatec3p09B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  AWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVS
Query Conservation   


 
  

 

  

       

 





   
     
   

  
 

              
   
  
   
Alig confidence 









....















































....













Template Conservation   
 
 
  
 ....  
     
 

  

      
     
   
   
 
         ....             
Template Sequence  GIYTLNTDNI. . . . KYNESYHFPICSVFKFLLVGAILDYDXHNQGFLDKKIPINQDDIGKLG. . . . YAPITAKNVGKTLT
Template Known Secondary structure 



....STTS

GGGSTTGGG


TT

....

TTTGGGTTS
Template Predicted Secondary structure 


....




















....








Template SS confidence 















































































   37..40...... ...50.........60.........70.........80.........90.... .....100........
 
   121........130.........140.........150.........160......... 170.........180.........190....
Predicted Secondary structure 











......










Query SS confidence 
















































. . . . . .
























Query Sequence  VADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTF. . . . . . QTVHGLDAPGQFSTARDMALLGKAL
Query Conservation 
 


   

 
 



 


  



   

  

  
 


   
 
...... 

 

      


 


 
    
Alig confidence 





.


















.....

















......
























Template Conservation     
  .     




  
     
.....   
      

   
                  
 


 
   

  
Template Sequence  ISQLNY. AAILSDSPASNILVRELGG. . . . . LQNLNKFIKKLGDNDTIITADEPEINYTQPHSNINKTTPKAITKDIYKL
Template Known Secondary structure  .TT
T
.....TT

S
B



TTGGG


TT

TT
Template Predicted Secondary structure  .

.....
























Template SS confidence 















































































   112..... ..120.........130...... ...140.........150.........160.........170.........180.....
 
   195....200.........210.........220.........230 .........240... ......250.. .......260.........270
Predicted Secondary structure 











.



.
.





.
Query SS confidence 



































.












.








.

















.
Query Sequence  IHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLN. VDGMKTGTTAGAG. YNLVASATQ. GDMRLISVVLGAKTDRIR.
Query Conservation      
    
              
 
 

      .
 
 


 
  

.  

  
  . 
   
 



      
.
Alig confidence 


.































.












.








.

















.
Template Conservation     .              
         
    
    
  


     
   
 


    
  




          
Template Sequence  AFG. NILDKKHKDIFIKYLQDNNTGANRIAFSXPKDWIIGDKTGTCGQYAATNDVAIIWPKNQQPIALGILYTNPNDKNA
Template Known Secondary structure  S.SSS


S
TTTGGGGS
TTS
SSTT

TTS


TT
TT
Template Predicted Secondary structure 
.






































Template SS confidence 















































































   186.. .190.........200.........210.........220.........230.........240.........250.........260....
 
   271........280.....
Predicted Secondary structure  .......
Query SS confidence  . . . . . . .














Query Sequence  . . . . . . . FNESEKLLTWGFRFF
Query Conservation  .......      

   
   
Alig confidence  .......














Template Conservation        
  
   
        
Template Sequence  PSNEEIIQQAAKLIANDLTNTY
Template Known Secondary structure 



Template Predicted Secondary structure 

Template SS confidence 





















   265....270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions