Job Description P08506 Confidence 98.54% Date Wed Jan 25 15:20:14 GMT 2012 Rank 88 Aligned Residues 157 % Identity 22% Template c3ozhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase/d-alanine carboxypeptidase; PDBTitle: crystal structure of beta-lactamase/d-alanine carboxypeptidase from2 yersinia pestis Resolution 1.91 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	D	A	R	A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		G	A	V	G	X	A	L	V	V	I	D	N	.	.	N	Q	V	V	N	R	S	F	G	E	T	Q	P	G	N	N	I	R	P	R	P	D	S	L	I	R	I	A	S	I	T	K	L	X	T	S	E	I	X	V	K	L	A	D	D	G	I	V	K	L	T	D	P	L	K	K	Y	A	P	K	G	V	N	V	P	S
Template Known Secondary structure		T		S									T	.	.	T										S	S	T	T							T	T		B				G	G	G															T	T	S			T	T		B	G	G	G	G	S		T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
								91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence		.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		.	.	.	.	.	.	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S	V	A	D	L	N	K	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	.	.	.	.	A	G	S	Q
Query Conservation		.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence		.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		Y	S	A	K	Q	P	I	R	L	L	H	L	A	S	H	T	S	G	L	P	R	E	Q	P	G	G	P	Q	K	R	P	V	F	T	W	P	T	K	D	N	R	W	Q	W	L	K	L	A	K	V	T	V	P	P	G	V	K	A	A	Y	S	N	L	A	Y	D	L	L	A	D	A	L	S	R	A	A	G	K	P	Y
Template Known Secondary structure		S	S	T	T				B						T	T		S				S	S		S	S			S	S			T	T			S										T	T					S		T	T	S																					T	S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		A	H	L	L	R	.	.	D	K	I	T	A	P	L	G	X	K	N	T	T	L	T	P	T	A	E	Q	C	K	R	L	X	I	G	V	G	S	S	R	C	G	N	T	V	A	A	A	G	S	G	G	I	Y	S	T	P	E	D	X	Q	H	W	X	Q	Q	F	L	A
Template Known Secondary structure							.	.			T					T		T	T		B	S	S							T	T	B				T	T								G	G	G	T	T	T	T															T	T	S
Template Predicted Secondary structure							.	.
Template SS confidence
		215	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions