Job Description P08506 Confidence 99.27% Date Wed Jan 25 15:20:14 GMT 2012 Rank 54 Aligned Residues 201 % Identity 17% Template c3hbrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:oxa-48; PDBTitle: crystal structure of oxa-48 beta-lactamase Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S
Query Conservation
Alig confidence																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	L	W	N	E	Q	Q	G	F	T	N	N	L	K	R	A	N	Q	A	F	L	P	A	S	T	F	I	P	N	S	L	I	.	.	.	.	A	L	D	L	G	V	V	K	D	E	H	Q	V	.	.	.	.	.	.	.	.	.	.	.	F	K	W	D	G	Q	T	R	D	I	A	T	W	N	R	D	H	N
Template Known Secondary structure														S		T	T	G	G	G						G	G	G								.	.	.	.					T	S	S		S	T	T			.	.	.	.	.	.	.	.	.	.	.	B				S				S	S	G	G	G	S	S		B
Template Predicted Secondary structure																																				.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.																						.
Query SS confidence																																																										.	.																						.
Query Sequence		V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	.	.	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H	D	.
Query Conservation																																																										.	.																						.
Alig confidence					.	.	.	.																			.	.	.	.	.	.																										.	.																						.
Template Conservation					.	.	.	.																			.	.	.	.	.	.
Template Sequence		L	I	T	.	.	.	.	A	M	K	Y	S	V	V	P	V	Y	Q	E	F	A	R	Q	I	G	.	.	.	.	.	.	E	A	R	M	S	K	M	L	H	A	F	D	Y	G	N	E	D	I	S	G	N	V	D	S	F	W	L	D	G	G	I	R	I	S	A	T	E	Q	I	S	F	L	R	K	L	Y	H	N	K
Template Known Secondary structure					.	.	.	.				T	T														.	.	.	.	.	.												T		T	T					S		T	T	T					S	S																	T	T
Template Predicted Secondary structure					.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		111	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
					198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.
Predicted Secondary structure		.	.	.																																			.															.	.	.																		.	.	.	.
Query SS confidence		.	.	.																																			.															.	.	.																		.	.	.	.
Query Sequence		.	.	.	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	.	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	.	.	.	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L	.	.	.	.	G	A	K	T
Query Conservation		.	.	.																																			.															.	.	.																		.	.	.	.
Alig confidence		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.																		.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	V	S	E	R	S	Q	R	I	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	M	L	T	E	A	N	G	D	Y	I	I	R	A	K	T	G	Y	S	T	R	I	E	P	K	I	G	W	W	V	G	W	V	E	L	D	D	N	V	W	F	F	A	M	N	M	D	M	P	T	S	D	G
Template Known Secondary structure		S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.			T						S	S												S	S	S	S												S	S												S	S	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.															.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	R	F	N	E	S	E	K	L	L	T	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	R	Q	A	I	T	K	E	V	L	K	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions