Return to main results Retrieve Phyre Job Id

Job DescriptionP08506
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank27Aligned Residues226
% Identity13%Templatec3cjmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative beta-lactamase; PDBTitle: crystal structure of putative beta-lactamase (np_815223.1) from2 enterococcus faecalis v583 at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  AWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVS
Query Conservation   


 
  

 

  

       

 





   
     
   

  
 

              
   
  
   
Alig confidence 











.















































.....













Template Conservation 

 
 

 

  .   
       

  

 
    
     
   
   
          .....         
   
Template Sequence  GISYLDLETGEQ. RSVNGQHEFYTASTIKVPLTXLVADTVASGQKKWTDLIPYNAEEDYEE. . . . . GTGIIAYNIQPEYP
Template Known Secondary structure  TTT

.STT


GGGGTTS

TT





.....SS
SGGGS

S
Template Predicted Secondary structure 




.




















.....













Template SS confidence 















































































   84.....90..... ....100.........110.........120.........130.........140... ......150.......
 
   121........130.........140.........150.........160.........170.........180.........190.........200
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPE
Query Conservation 
 


   

 
 



 


  



   

  

  
 


   
 
 

 

      


 


 
        
 
Alig confidence 










































............
























Template Conservation 
  
   

  


 


 
   


                 ............    
 

  
 
 

  
      
Template Sequence  LKTLQEYAITYSDNIAKNXLYDTLGGDAKAKREXYQRYLHKTP. . . . . . . . . . . . SIEEPQFSSEDALVILQKLYTEKAT
Template Known Secondary structure  T

TT
TS


............
SSS

TTT
Template Predicted Secondary structure 








............












Template SS confidence 















































































   158.160.........170.........180.........190.........200 .........210.........220.....
 
   201........210.........220.........230.........240.........250.........260.........270. .....
Predicted Secondary structure 



















....
Query SS confidence 






































































. . . .




Query Sequence  EYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRF. . . . NESEK
Query Conservation     
              
 
 

      
 
 


 
  

  

  
   
   
 



      
 ....     
Alig confidence 














...























.



























....




Template Conservation                 ...        

   
  


     .  
 


     


 
             
  

  
Template Sequence  KPDYQAIYDSXKQSV. . . FHERXETPTTQGKVAHKIGSYDEF. IHDXGILETPHPFALAIFTKGPDNAKSAAFIASVTDK
Template Known Secondary structure 
S
S...


TT

TTTTTSTT.
SSS

S
Template Predicted Secondary structure 



...












.







Template SS confidence 















































































   226...230.........240 .........250.........260.... .....270.........280.........290.........300.
 
   277..280........
Predicted Secondary structure 
Query SS confidence 











Query Sequence  LLTWGFRFFETV
Query Conservation 

   
      
Alig confidence 











Template Conservation 
           
Template Sequence  LWQLQVSEYPNQ
Template Known Secondary structure  S



Template Predicted Secondary structure 




Template SS confidence 











   302.......310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions