Job Description P08506 Confidence 98.82% Date Wed Jan 25 15:20:14 GMT 2012 Rank 78 Aligned Residues 239 % Identity 21% Template c2wzzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: amp-c beta-lactamase (pseudomonas aeruginosa)in complex2 with compound m-03 Resolution 1.57 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	D	A	R	A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		D	I	P	G	L	A	V	A	I	S	L	.	.	K	G	E	P	H	Y	F	S	Y	G	L	A	S	K	E	D	G	R	R	V	T	P	E	T	L	F	E	I	G	S	V	S	K	T	F	T	A	T	L	A	G	Y	A	L	T	Q	D	K	M	R	L	D	D	R	A	S	Q	H	W	P	A	L	Q	G	S	R	F
Template Known Secondary structure		T		S									.	.	T	T									B	S		T	T	T			B			T	T						G	G	G															T	T	S			T	T	S	B	G	G	G	G		G	G	G	T	T	S	G	G
Template Predicted Secondary structure													.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
			92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.																																											.	.	.	.	.	.	.	.												.
Query SS confidence		.																																											.	.	.	.	.	.	.	.												.
Query Sequence		.	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q	V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	.	.	.	.	.	.	.	.	N	D	A	C	I	A	L	A	D	Y	V	.	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K
Query Conservation		.																																											.	.	.	.	.	.	.	.												.
Alig confidence		.																																											.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		D	G	I	S	L	L	D	L	A	T	Y	T	A	G	G	L	P	L	Q	F	P	D	S	V	Q	K	D	Q	A	Q	I	R	D	Y	Y	R	Q	W	Q	P	T	Y	A	P	G	S	Q	R	L	Y	S	N	P	S	I	G	L	F	G	Y	L	A	A	R	S	L	G	Q	P	F	E	R	L	M	E	Q	Q	V	F	P
Template Known Secondary structure		G	G		B						T	T		S	S				S	S			T	T			S															S	S		T	T	T																				T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
			162	.	.	.	.	.	.	.	170	.	.	.	.	.																									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L	I	H	D	V	P	E	E	Y	A	I	H	K	E	K	E	F	T	F	N	K	I	R
Query Conservation		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																														.	.
Template Sequence		A	L	G	L	E	Q	T	H	L	D	V	P	E	A	A	L	A	Q	Y	A	Q	G	Y	G	K	D	D	R	P	L	R	V	G	P	G	P	L	D	A	E	G	Y	G	V	K	T	S	A	A	D	L	L	R	F	V	D	A	N	L	H	.	.	P	E	R	L	D	R	P	W	A	Q	A	L	D	A	T	H	R	G
Template Known Secondary structure			T	T		S	S			S	S			G	G	G	G	G	G	B				B		G	G	G		B							T	T																								.	.	G	G	G	S										T	T	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																																							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	T	G	T	T	A	G	A	G	Y	N	L	V	A	S	A	T	Q	G	D	M	R	L	I
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																		.
Template Sequence		Y	Y	K	V	G	D	M	T	Q	G	L	G	W	E	A	Y	D	W	P	I	S	L	K	R	L	Q	A	G	N	S	T	P	M	A	L	Q	P	H	R	I	A	R	L	P	A	P	Q	A	L	E	G	Q	R	L	L	N	K	T	G	S	T	N	G	F	.	G	A	Y	V	A	F	V	P	G	R	D	L	G	L	V
Template Known Secondary structure						T	T					S	S						S	S										T	S						S															S	S										S	S		.								G	G	G	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	V	L	G	A	K	T	D	R	I	R	F	N	E	S	E	K	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	A	N	R	N	Y	P	N	A	E	R	V	K	I	A	Y	A	I	L	S
Template Known Secondary structure					S	B
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions