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Job DescriptionP08506
Confidence99.97%DateWed Jan 25 15:20:14 GMT 2012
Rank32Aligned Residues230
% Identity19%Templatec2wuqA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  AWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVS
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Template Sequence  SFLVRDLYTGEEL. GIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITTPGP. . . . TGLSRFRHPARVA
Template Known Secondary structure  TTT

.STT


GGGGTTSS
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GGGG
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   23......30..... ....40.........50.........60.........70.........80.... .....90.......
 
   121........130.........140.........150.........160.........170 .........180.........190...
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Query Sequence  VADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQ. . . . . . . TVHGLDAPGQFSTARDMALLGKA
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Template Sequence  VDDLLYLSTSVSDGTASDALFEITP. . . . . . PAQVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEA
Template Known Secondary structure  S

S
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TT


SGGG
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   98.100.........110.........120.. .......130.........140.........150.........160.........170.
 
   194.....200.........210..... ....220..... ....230.........240.........250.........260.. ......
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Query Sequence  LIHDVPEEYAIHKEKEFTFNKI. . RQPNRNRLLW. . SSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVL. GAKTDR
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Template Sequence  LWAPVLTGPALPPEPAARLRELMAANLLRHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTESQVPA
Template Known Secondary structure  GGG






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   202.......210.........220.........230.........240.........250.........260.........270.........280.
 
   269270.........280.
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Query Sequence  IRFNESEKLLTWG
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Template Sequence  DSQPGAEALMAQV
Template Known Secondary structure  S

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   289290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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