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Job DescriptionP08506
Confidence98.01%DateWed Jan 25 15:20:14 GMT 2012
Rank93Aligned Residues145
% Identity16%Templatec2olvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.... .....60.........70.........80.........90.........100........
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Query Sequence  AWILMDYASGKVLA. . . . . . . . . . . . EGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGS
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Template Sequence  GATILDSKTGGLVAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGP. . AIENXKWATNHAI. . . . . . . . QDESSYQVD
Template Known Secondary structure  TTT
BSSTT

TTTS

TTSS

GGGGT..


TTB........

S
SS
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   361........370.........380.........390.........400........ .410.........420. ........430
 
   109110.........120.........130.........140.........150.........160..... ....170.........180.......
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Query Sequence  SVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLT. NTTFQTVHGLDAPGQFSTARDM
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Template Sequence  GSTFRNYDTKSHGTVSIYDALRQSFNIPALKAWQSVK. . QNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQL
Template Known Secondary structure  S


SS
S


TT
..T
TTTTT


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TT
TT

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   431........440.........450.........460....... ..470.........480.........490.........500........
 
   188.190.......
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Query Sequence  ALLGKALIHD
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Template Sequence  ASAFAAIANG
Template Known Secondary structure  TT
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   509510........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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