Job Description P08506 Confidence 99.40% Date Wed Jan 25 15:20:14 GMT 2012 Rank 52 Aligned Residues 197 % Identity 19% Template c2jc7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase oxa-24; PDBTitle: the crystal structure of the carbapenemase oxa-24 reveals2 new insights into the mechanism of carbapenem-hydrolysis Resolution 2.5 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	W	I	L	M	D	Y	A	S	G	K	V	L	A	E	G	.	.	N	A	D	E	K	L	D	P	A	S	L	T	K	I	M	T	S	Y	V	V	G	Q	A	L	K	A	D	K	I	K	L	T	D	M	V	T	V	G	K	D	A	W	A	T	G	N	P	A	L	R	G	S	S	V	M	F	L	K	P	G	D	Q
Query Conservation																		.	.
Alig confidence																		.	.																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	I	I	K	E	G	K	N	L	S	T	Y	G	N	A	L	A	R	A	N	K	E	Y	V	P	A	S	T	F	K	M	L	N	A	L	I	G	L	E	N	.	.	.	H	K	A	T	T	N	E	I	F	.	.	.	.	.	.	.	.	.	.	.	.	K	W	D	G	K	K	R	T	Y	P	M	W	E	K	D
Template Known Secondary structure								T	T							S		G	G	G	G	G			B			G	G	G	G											T	.	.	.	T	S			S	S			B	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S	S	G	G	G	S	S
Template Predicted Secondary structure																																											.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		V	S	V	A	D	L	N	K	G	V	I	I	Q	S	G	N	D	A	C	I	A	L	A	D	Y	V	A	G	S	Q	E	S	F	I	G	L	M	N	G	Y	A	K	K	L	G	L	T	N	T	T	F	Q	T	V	H	G	L	D	A	.	.	.	.	P	G	Q	F	S	T	A	R	D	M	A	L	L	G	K	A	L
Query Conservation																																																													.	.	.	.
Alig confidence							.	.	.	.																			.	.	.	.	.	.																	.	.									.	.	.	.
Template Conservation							.	.	.	.																			.	.	.	.	.	.																	.	.
Template Sequence		M	T	L	G	E	.	.	.	.	A	M	A	L	S	A	V	P	V	Y	Q	E	L	A	R	R	T	G	.	.	.	.	.	.	L	E	L	M	Q	K	E	V	K	R	V	N	F	G	N	T	.	.	N	I	G	T	Q	V	D	N	F	W	L	V	G	P	L	K	I	T	P	V	Q	E	V	N	F	A	D	D	L
Template Known Secondary structure		B					.	.	.	.					T														.	.	.	.	.	.												T		T	T		.	.			T	T		T	T	T					S	S			B
Template Predicted Secondary structure							.	.	.	.																			.	.	.	.	.	.																	.	.
Template SS confidence
		119	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure															.	.	.	.	.	.																																							.	.	.																		.	.	.
Query SS confidence															.	.	.	.	.	.																																							.	.	.																		.	.	.
Query Sequence		I	H	D	V	P	E	E	Y	A	I	H	K	E	.	.	.	.	.	.	K	E	F	T	F	N	K	I	R	Q	P	N	R	N	R	L	L	W	S	S	N	L	N	V	D	G	M	K	T	G	T	T	A	G	A	G	Y	N	.	.	.	L	V	A	S	A	T	Q	G	D	M	R	L	I	S	V	V	L	.	.	.
Query Conservation															.	.	.	.	.	.																																							.	.	.																		.	.	.
Alig confidence															.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																		.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	N	R	L	P	F	K	L	E	T	Q	E	E	V	K	K	M	L	L	I	K	E	V	N	G	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	A	K	S	G	W	G	M	G	V	T	P	Q	V	G	W	L	T	G	W	V	E	Q	A	N	G	K	K	I	P	F	S	L	N	L	E
Template Known Secondary structure			T	T		S	S	S											T	T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S	S												T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
				263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	A	K	T	D	R	I	R	F	N	E	S	E	K	L	L	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		M	K	E	G	M	S	G	S	I	R	N	E	I	T	Y	K	S	L	E
Template Known Secondary structure				T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions