Job Description P77234 Confidence 97.22% Date Thu Jan 5 12:26:39 GMT 2012 Rank 32 Aligned Residues 247 % Identity 12% Template c3nf1A_ PDB info PDB header:motor protein, transport protein Chain: A: PDB Molecule:kinesin light chain 1; PDBTitle: crystal structure of the tpr domain of kinesin light chain 1 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		D	C	E	A	Q	Y	I	V	G	F	Y	Y	N	R	D	S	A	I	D	S	P	D	D	E	K	A	F	Y	W	L	K	L	A	A	E	.	.	.	.	.	.	.	.	.	.	Q	G	H	C	E	A	Q	Y	S	L	G	Q	K	Y	T	E	D	K	S	R	H	K	D	N	E	Q	A	I	F	W	L	K	K	A	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		R	L	R	T	L	H	N	L	V	I	Q	Y	A	S	.	.	.	.	.	Q	G	R	Y	E	V	A	V	P	L	C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	D	A	A	N	L	L	N	D	A	L	A	I	R	E
Template Known Secondary structure																.	.	.	.	.	T	T																						S	S	S																	T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	H	T	F	A	S	N	A	L	G	W	T	L	D	R	G	E	A	P	N	Y	K	E	A	V	V	W	Y	Q	I	A	A	E	S	G	M	S	Y	A	Q	N	N	L	G	W	M	Y	R	N	G	N	G	V	A	K	D	Y	A	L	A	F	F	W	Y	K	Q	A	A	L	Q	G	H	S	D	A	Q	N	N
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	Y	G	K	R	G	K	Y	K	E	A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	D	H	P	D
Template Known Secondary structure						T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T																						T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																														.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	L	Y	E	D	G	K	G	V	A	Q	N	K	T	L	A	A	F	W	Y	L	K	S	A	Q	Q	G	N	R	H	A	Q	F	Q	I	A	W	D	Y	N	A	G	E	G	V	D	Q	D	Y	K	Q	A	M	Y	W	Y	L	K	A	A	A	Q	G	S	V	G	A	Y	V	N	I	G	Y	M	Y	K	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	K	Q	L	N	N	L	A	L	L	C	Q	N	Q	G	K	Y	E	E	V	E	Y	Y	Y	Q	R	A	L	E	I	Y	Q	T	K	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L	K	Q	G	K	F	K	Q	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	R	E	F	G
Template Known Secondary structure															T	T	T																			T	S		T	T																			T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		Q	G	V	E	K	D	Y	Q	A	A	F	E	W	F	T	K	A	A	E	C	N	.	.	D	A	T	A	W	Y	N	L	A	I	M	Y	H	Y	G	E	G	R	P	V	D	L	R	Q	A	L	D	L	Y	R	K	V	Q	S
Query Conservation																							.	.
Alig confidence																							.	.															.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		K	P	I	W	M	H	A	E	E	R	E	E	C	T	S	F	G	E	Y	G	S	P	T	V	T	T	T	L	K	N	L	G	A	L	Y	R	R	.	.	.	.	Q	G	K	F	E	A	A	E	T	L	E	E	A	A	M	R
Template Known Secondary structure																	S																						.	.	.	.		T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460					.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions