 |
| Job Description | P77234 | | Confidence | 96.79% | Date | Thu Jan 5 12:26:39 GMT 2012 |
| Rank | 40 | Aligned Residues | 64 |
| % Identity | 17% | Template | c3fp4A_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:tpr repeat-containing protein yhr117w; |
PDBTitle: crystal structure of tom71 complexed with ssa1 c-terminal2 fragment
|
| Resolution | 2.14 Å |
|
| | |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | |
|
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | |
|
| . | . |
| | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | | | | |
| . | . |
|
| | | | | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
K | D | Y | Q | A | A | F | E | W | F | T | K | A | A | E | C | N | . |
. |
D | A | T | A | W | Y | N | L | A | I | M | Y | H | Y | G | E | G | R | P | V | D | L | R | Q | A | L | D | L | Y | R | K | V | Q | S | S | . |
. |
G | T | R | D | V | S | Q | E | I | R | E | T | E | D | L | L |
| Query Conservation | |
| | | | |
| | | | | | |
|
| | |
| . | . | | | |
| | | |
|
| | |
| | |
| |
|
| | |
| | | |
| | | |
| |
|
|
| | | . | . |
| | | |
| | | |
| | |
| | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | |
|
| | | | | |
|
| | | |
| | | | | | | | |
|
| | | | | | . | . | . | . | | | | | | |
| | | | | | |
|
| |
| |
| | | | |
| | | |
|
| | | | | | |
| Template Sequence | |
K | N | F | N | E | A | I | K | Y | Y | Q | Y | A | I | E | L | D | P | N | E | P | V | F | Y | S | N | I | S | A | C | Y | I | S | . |
. |
. |
. |
T | G | D | L | E | K | V | I | E | F | T | T | K | A | L | E | I | K | P | D | H | S | K | A | L | L | R | R | A | S | A | N | E | S | L |
| Template Known Secondary structure | |
T |
| | | | | | | | | | | | | T | T |
| T | T |
| | | | | | | | | | | | | T | . | . | . | . | T | T |
| | | | | | | | | | | | | | |
| T | T |
| | | | | | | | | | | | | | T |
| Template Predicted Secondary structure | |
|
| | | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | | | | . | . | . | . |
|
|
| | | | | | | | | | | | | | |
|
|
|
| | | | | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
