Job Description P77234 Confidence 70.00% Date Thu Jan 5 12:26:39 GMT 2012 Rank 98 Aligned Residues 61 % Identity 10% Template c2yhcA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:upf0169 lipoprotein yfio; PDBTitle: structure of bamd from e. coli Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		C	E	A	Q	Y	I	V	G	F	Y	Y	N	R	D	S	A	I	D	S	P	D	D	E	K	A	F	Y	W	L	K	L	A	A	E	Q	G	H	.	.	.	.	.	C	E	A	Q	Y	S	L	G	Q	K	Y	T	E	D	K	S	R	H	K	D	N	E	Q	A	I	F	W	L	K
Query Conservation																																							.	.	.	.	.
Alig confidence															.	.	.	.	.																				.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		P	N	E	I	Y	A	T	A	Q	Q	K	L	Q	.	.	.	.	.	D	G	N	W	R	Q	A	I	T	Q	L	E	A	L	D	N	R	Y	P	F	G	P	Y	S	Q	Q	V	Q	L	D	L	I	Y	A	Y	Y	K	N	A	D	L	P	L	A	Q	A	A	I	D	R	F	I	R
Template Known Secondary structure															.	.	.	.	.		T																	T	T	S	T	T															T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions