Job Description P77234 Confidence 98.78% Date Thu Jan 5 12:26:39 GMT 2012 Rank 7 Aligned Residues 307 % Identity 10% Template c2y4tA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 3; PDBTitle: crystal structure of the human co-chaperone p58(ipk) Resolution 3.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.																																					.	.
Query SS confidence															.	.																																					.	.
Query Sequence		N	L	S	I	D	E	I	I	E	R	A	E	K	.	.	G	D	C	E	A	Q	Y	I	V	G	F	Y	Y	N	R	D	S	A	I	D	S	P	D	D	E	K	A	F	Y	W	L	K	L	A	A	E	.	.	Q	G	H	C	E	A	Q	Y	S	L	G	Q	K	Y	T	E	D	K	S	R	H	K	D	N	E	Q	A
Query Conservation															.	.																																					.	.
Alig confidence															.	.																.	.	.	.	.																	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		A	D	A	L	S	Q	F	H	A	A	V	D	G	D	P	D	N	Y	I	A	Y	Y	R	R	A	T	V	F	L	A	.	.	.	.	.	M	G	K	S	K	A	A	L	P	D	L	T	K	V	I	Q	L	K	M	D	F	T	A	A	R	L	Q	R	G	H	L	L	L	K	Q	G	K	L	D	E	A	E	D	D	F
Template Known Secondary structure																T	T															.	.	.	.	.	T	T																	T	T															T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		86	.	.	.	90	.																				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	W	L	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	Q	G	H	T	F	A	S	N	A	L	G	W	T	L	D	R	G	E	A	P	N	Y	K	E	A	V	V	W	Y	Q	I	A	A	E	S	G	M	S	Y	A	Q	N	N	L	G	W	M	Y	R	N	G	N
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	V	L	K	S	N	P	S	E	N	E	E	K	E	A	Q	S	Q	L	I	K	S	D	E	M	Q	R	L	R	S	Q	A	L	N	A	F	G	S	G	D	Y	T	A	A	I	A	F	L	D	K	I	L	E	V	C	V	W	D	A	E	L	R	E	L	R	A	E	C	F	I	K	E	G	E	P	R	K	A	I
Template Known Secondary structure						T	S																																		T																	T	T															T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	K	D	Y	A	L	A	F	F	W	Y	K	Q	A	A	L	Q	G	H	S	D	A	Q	N	N	L	A	D	L	Y	E	D	G	K	G	V	A	Q	N	K	T	L	A	A	F	W	Y	L	K	S	A	Q	Q	G	N	R	H	A	Q	F	Q	I	A	W	D	Y	N	A	G	E	G	V	D	Q	D	Y	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	L	K	A	A	S	K	L	K	N	D	N	T	E	A	F	Y	K	I	S	T	L	Y	Y	Q	L	G	D	H	E	L	S	L	S	E	V	R	E	C	L	K	L	D	Q	D	H	K	R	C	F	A	H	Y	K	Q	V	K	K	L	N	K	L	I	E	S	A	E	E	L	I	R	D	G	R	Y	T	D	A	T
Template Known Secondary structure													S															T	T																	T	T																												T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		A	M	Y	W	Y	L	K	A	A	A	Q	G	S	V	G	A	Y	V	N	I	G	Y	M	Y	K	H	G	Q	G	V	E	K	D	Y	Q	A	A	F	E	W	F	T	K	A	A	E	C	N	.	.	D	A	T	A	W	Y	N	L	A	I	M	Y	H	Y	G	E	G	R	P	V	D	L	R	Q	A	L	D	L	Y	R
Query Conservation																																																		.	.
Alig confidence																																																		.	.															.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		S	K	Y	E	S	V	M	K	T	E	P	S	I	A	E	Y	T	V	R	S	K	E	R	I	C	H	C	F	S	K	D	E	K	P	V	E	A	I	R	V	C	S	E	V	L	Q	M	E	P	D	N	V	N	A	L	K	D	R	A	E	A	Y	L	I	.	.	.	.	E	E	M	Y	D	E	A	I	Q	D	Y	E
Template Known Secondary structure													S	S																	T	T	T																	T	T															.	.	.	.	T	T
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.					.	.	.	.	.	.	.	360	.	.	.	.
		305	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		K	V	Q	S	S	.	.	G	T	R	D	V	S	Q	E	I	R	E	T	E	D	L	L
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		T	A	Q	E	H	N	E	N	D	Q	Q	I	R	E	G	L	E	K	A	Q	R	L	L
Template Known Secondary structure					T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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