Job Description P77234 Confidence 94.01% Date Thu Jan 5 12:26:39 GMT 2012 Rank 76 Aligned Residues 83 % Identity 11% Template c2r5sB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp0806; PDBTitle: the crystal structure of a domain of protein vp0806 (unknown function)2 from vibrio parahaemolyticus rimd 2210633 Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																								.	.																																					.	.	.	.
Query SS confidence																								.	.																																					.	.	.	.
Query Sequence		I	F	T	S	S	C	C	D	N	L	S	I	D	E	I	I	E	R	A	E	K	G	.	.	D	C	E	A	Q	Y	I	V	G	F	Y	Y	N	R	D	S	A	I	D	S	P	D	D	E	K	A	F	Y	W	L	K	L	A	A	E	Q	.	.	.	.	G	H	C	E	A	Q	Y	S	L	G	Q	K	Y	T	E	D
Query Conservation																								.	.																																					.	.	.	.
Alig confidence																								.	.															.	.	.	.	.																		.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		E	L	H	Q	Q	A	A	E	S	P	E	L	K	R	L	E	Q	E	L	A	A	N	P	D	N	F	E	L	A	C	E	L	A	V	Q	Y	N	Q	.	.	.	.	.	V	G	R	D	E	E	A	L	E	L	L	W	N	I	L	K	V	N	L	G	A	Q	D	G	E	V	K	K	T	F	X	D	I	L	S	A	L
Template Known Secondary structure								T	S															T	T															.	.	.	.	.	T	T														T	T		T	T	T	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	H	K	D	N	E	Q	A	I	F	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	G	N	A	I	A	S	K	Y	R	R	Q	L
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions