Phyre 2 alignment of P77234 with c2dbaA

Job Description P77234
Confidence 96.64% Date Thu Jan 5 12:26:39 GMT 2012

Rank 45 Aligned Residues 61

% Identity 23% Template c2dbaA_

PDB info PDB header:structural protein Chain: A: PDB Molecule:smooth muscle cell associated protein-1, isoform PDBTitle: the solution structure of the tetratrico peptide repeat of2 human smooth muscle cell associated protein-1, isoform 2

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																		.	.																																				.	.
Query SS confidence																		.	.																																				.	.
Query Sequence	K	D	Y	Q	A	A	F	E	W	F	T	K	A	A	E	C	N	.	.	D	A	T	A	W	Y	N	L	A	I	M	Y	H	Y	G	E	G	R	P	V	D	L	R	Q	A	L	D	L	Y	R	K	V	Q	S	S	.	.	G	T	R	D	V	S	Q	E	I	R	E	T	E
Query Conservation																		.	.																																				.	.
Alig confidence																		.	.															.	.	.	.																		.	.
Template Conservation																																		.	.	.	.
Template Sequence	E	D	Y	D	K	A	E	T	E	A	S	K	A	I	E	K	D	G	G	D	V	K	A	L	Y	R	R	S	Q	A	L	E	K	.	.	.	.	L	G	R	L	D	Q	A	V	L	D	L	Q	R	C	V	S	L	E	P	K	N	K	V	F	Q	E	A	L	R	N	I	S
Template Known Secondary structure	T																T	S																.	.	.	.		T																	S	S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions