Job Description P0A6C1 Confidence 99.95% Date Thu Jan 5 11:02:47 GMT 2012 Rank 30 Aligned Residues 270 % Identity 18% Template d1qt1a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.		.	.	.
Predicted Secondary structure																																											.																										.	.	.	.						.
Query SS confidence																																											.																										.	.	.	.						.
Query Sequence		Y	I	G	A	H	V	S	A	A	G	G	L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	.	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	.	.	.	.	H	D	S	Y	L	.	I	N	L
Query Conservation																																											.																										.	.	.	.						.
Alig confidence																																											.																										.	.	.	.						.
Template Conservation
Template Sequence		P	F	G	D	A	T	R	G	A	L	D	P	A	E	S	V	R	R	L	A	E	L	G	A	H	G	V	T	F	H	D	D	D	L	I	P	F	G	A	T	D	S	E	R	A	E	H	I	K	R	F	R	Q	G	L	D	E	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K	D	G	G	F
Template Known Secondary structure		T	T	B			S	S																T												S		T	T																					T											S	S	S	G	G	G	T	T		S	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																												.	.	.	.
Query SS confidence																																						.	.	.	.																												.	.	.	.
Query Sequence		G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	.	.	.	.	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	.	.	.	.	V	T	A	V	I	E	N	T	A
Query Conservation																																						.	.	.	.																												.	.	.	.
Alig confidence																																						.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	A	V	E	L	G	A	Q	T	Y	V	A	W	G	G	R	E	G	A	E	S	G	A	A	K	D	V	R	V	A	L	D	R	M	K	E	A	F	D	L	L	G	E	Y	V	T	S	Q	G	Y	D	T	P	F	A	I	E	P	K	P
Template Known Secondary structure		T		S	S																						T		S							T	T	S			S	S	S	S	S																									T											S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		149	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	Q	G	S	.	.	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S
Query Conservation						.	.
Alig confidence						.	.																																				.	.	.	.	.	.													.	.	.															.	.	.
Template Conservation																																											.	.	.	.	.	.													.	.	.															.	.	.
Template Sequence		N	E	P	R	G	D	I	L	L	P	T	I	G	H	A	L	A	F	I	D	G	L	E	R	P	E	L	Y	G	V	N	P	E	V	G	H	E	Q	M	A	G	.	.	.	.	.	.	L	N	F	P	H	G	I	A	Q	A	L	W	.	.	.	A	G	K	L	F	H	I	D	L	N	G	Q	S	G	.	.	.	I
Template Known Secondary structure		S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B						T	T	T	.	.	.	.	.	.													.	.	.	T	T		B							B			S	.	.	.	S
Template Predicted Secondary structure																																											.	.	.	.	.	.													.	.	.															.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250				.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																		.																								.	.	.	.	.	.
Query SS confidence																		.																								.	.	.	.	.	.
Query Sequence		R	V	D	R	H	H	S	L	G	E	G	N	I	G	H	D	.	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A	V	A
Query Conservation																		.																								.	.	.	.	.	.
Alig confidence																		.															.									.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		K	Y	D	Q	D	L	R	F	G	P	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	E	G	P	.	R	H	F	D	F	K	P	P	R	T	E	D	F	D	G	V	W	A	S	A	A	G	C	M	R	N	Y	L	I	L	K	E	R	A
Template Known Secondary structure		S	S				B		S	S	S	S	S															T			S		.									T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions