Job Description P0A6C1 Confidence 40.56% Date Thu Jan 5 11:02:47 GMT 2012 Rank 220 Aligned Residues 112 % Identity 15% Template d1cgta4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.00

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		13	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.																									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	N	A	A	.	.	I	R	A	A	E	I	D	A	T	A	F	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I
Query Conservation								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	I	N	K	I	N	D	N	Y	F	S	D	L	G	V	T	A	L	W	I	S	Q	P	V	E	N	I	F	A	T	I	N	Y	S	G	V	T	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	Y	F	G	T	M	A	D	F	Q	N	L	I	T	T	A	H	A	K	G	I	K	I	V	I	D
Template Known Secondary structure									T	T						T															S					T	T						T	T	S		S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		67	.	.	70																																																								.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	P	N	H	T	S	P	A	M	E	T	D	T	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	V	G	G	Y	T	N	D	T	N	G	Y	F	H	H	N	G	G	S	D	F	S	S	L	E	N	G	I	Y	K	N	L	Y	D	L	A	D	F	N	H	N	N	A	T	I	D	K	Y	F	K	D	A	I
Template Known Secondary structure				T	T							T	T		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S							S	B	B	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		K	L	W	L	.	.	.	.	D	M	G	V	D	G	I	R	V	D	A	V	K	H	M	P	L	G	W	Q	K	S	W	M	S	S	I	Y	A
Template Known Secondary structure						.	.	.	.		T	T							S		G	G	G	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		216	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions