 |
Job Description | P0A6C1 | Confidence | 33.16% | Date | Thu Jan 5 11:02:47 GMT 2012 |
Rank | 258 | Aligned Residues | 73 |
% Identity | 12% | Template | c3qz6A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:hpch/hpai aldolase; |
PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
|
Resolution | 2.00 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Y | I | G | A | H | V | S | A | A | G | G | L | A | N | A | A | I | R | A | A | E | I | D | A | T | A | F | A | L | F | T | K | N | Q | R | Q | W | R | A | A | P | L | T | T | Q | T | I | D | E | F | K | A | A | C | E | K | Y | H | Y | T | S | A | Q | I | L | P | H | D | S | Y | L | I | N | L | G | H | P | V | T |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   | . |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|
|
|   |   |   |   |   |
Template Sequence |   |
S | V | V | G | T | X | L | N | L | V | Y | N | . |
P | D | I | V | R | I | Y | A | E | A | G | L | D | Y | F | I | V | D | C | E | . |
. |
. |
. |
. |
. |
H | A | A | Y | T | F | R | E | I | N | H | L | V | S | V | A | K | N | A | G | V | S | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | V | R | I | P | Q | V | D | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S |
|
|
| . | T | T |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S | S | . | . | . | . | . | . | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |
| S | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | L | E | K | S | R | D | A |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |
Template Sequence |   |
A | H | V | Q | R | L | L | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|