Job Description P0A6C1 Confidence 100.00% Date Thu Jan 5 11:02:47 GMT 2012 Rank 5 Aligned Residues 266 % Identity 10% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.
Predicted Secondary structure												.	.	.						.	.																																																					.	.
Query SS confidence												.	.	.						.	.																																																					.	.
Query Sequence		K	Y	I	G	A	H	V	S	A	A	.	.	.	G	G	L	A	N	.	.	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	.	.	H	D	S	Y	L	I
Query Conservation												.	.	.						.	.																																																					.	.
Alig confidence												.	.	.						.	.																																																					.	.
Template Conservation
Template Sequence		X	K	L	G	V	N	L	C	F	A	V	K	R	W	L	E	P	D	R	L	A	G	L	V	R	D	D	L	G	L	E	Y	V	Q	Y	T	Y	D	L	T	D	P	W	W	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A	S	Y	T	Y	N
Template Known Secondary structure								G	G	G	G	T	T	T	S		S											T	T									T	T	T	S		T	T	S																			T	T														T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.																						.	.
Query SS confidence																																												.	.	.	.	.																						.	.
Query Sequence		N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	.	.	.	.	.	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	.	.	Q	G	V	T	A	V	I	E	N	T
Query Conservation																																												.	.	.	.	.																						.	.
Alig confidence																																												.	.	.	.	.																						.	.
Template Conservation
Template Sequence		H	F	L	A	P	T	L	E	L	Q	S	L	G	Y	Q	H	L	K	R	A	I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A	K	R	Q	G	L	S	X	L	Y	V	E	P
Template Known Secondary structure		B	T	T		S	S																					T	T		S							B	B							T																											T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	G	Q	G	S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	.	.	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G
Query Conservation																								.	.
Alig confidence																								.	.																					.															.	.	.	.	.
Template Conservation																																														.															.	.	.	.	.
Template Sequence		V	P	L	A	T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D	L	D	G	R	T	E	I	P	V	R	L	L	V	D	W	G	H	A	L	F	E	P	L	F	.	G	P	E	A	D	X	D	H	W	X	D	L	C	Q	.	.	.	.	.	P	W	I	A	A	Y	H	I	Q	Q	T	D	G	Q	L	D
Template Known Secondary structure			S		T	T	B	S	S		S												T	T	T	S	S	S												T						.	G	G	G		S									G	.	.	.	.	.	G	G								B			S	S	S
Template Predicted Secondary structure																																														.															.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.										.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		S	R	V	D	R	H	H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		R	H	.	.	.	W	S	F	T	Q	P	G	V	V	T	P	Q	R	L	Q	D	F	W	D	K	Y	A	L	T	D	Q	T	F	F	A	E	I	L	Y	P	F	E	A	R	D	E	D	V	L	A	D	X	I	A	S	V	K	A	L	K
Template Known Secondary structure				.	.	.	B		T	T	S		S	S													T	T		S	S											T	T	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		235	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions