Job Description P0A6C1 Confidence 98.12% Date Thu Jan 5 11:02:47 GMT 2012 Rank 43 Aligned Residues 221 % Identity 14% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.				.	.	110
Predicted Secondary structure																										.	.	.	.	.	.																															.	.	.	.											.	.	.
Query SS confidence																										.	.	.	.	.	.																															.	.	.	.											.	.	.
Query Sequence		L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	.	.	.	.	.	.	P	H	D	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	.	.	.	.	C	E	Q	L	G	L	S	L	L	N	.	.	.	F	H	P
Query Conservation																										.	.	.	.	.	.																															.	.	.	.											.	.	.
Alig confidence																							.			.	.	.	.	.	.																															.	.	.	.											.	.	.
Template Conservation																							.
Template Sequence		L	E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	I	P	D
Template Known Secondary structure				G	G	G	G											T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																							.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	.	.	.	.	.	.	E	N	T	A	G	Q	G	S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F
Query Conservation																																				.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.																										.	.	.	.											.
Template Conservation																																																																			.	.	.	.											.
Template Sequence		G	Y	K	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	.	.	.	.	K	L	C	L	L	D	T	G	H	Y	.
Template Known Secondary structure				S	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T	.	.	.	.							T	T	S	S	.
Template Predicted Secondary structure																																																																			.	.	.	.											.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N
Query Conservation
Alig confidence		.	.	.	.	.	.																			.	.			.						.									.	.	.										.
Template Conservation		.	.	.	.	.	.																			.	.			.						.									.	.	.										.
Template Sequence		.	.	.	.	.	.	H	P	T	E	T	V	S	N	K	I	S	A	M	L	L	F	H	D	.	.	K	L	.	A	L	H	V	S	.	R	P	V	R	W	D	S	D	.	.	.	H	V	V	T	F	D	D	E	L	.	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F	F	D
Template Known Secondary structure		.	.	.	.	.	.		T	T			S												S	.	.			.						.	B		S	S	S				.	.	.	B				S					.										T	T		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																			.	.			.						.									.	.	.										.
Template SS confidence
								263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.		.	.	.	.	.		.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		265						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		P	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A	V
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		A	S	I	N	R	I	A	A	W	T	I	G	T	R	N	V	I	K	A	L	L	F	A	M	L
Template Known Secondary structure		T	T	S																						T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions