Job Description P0A6C1 Confidence 99.97% Date Thu Jan 5 11:02:47 GMT 2012 Rank 24 Aligned Residues 230 % Identity 17% Template c3lmzA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution Resolution 1.44 Å

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		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		Y	I	G	A	H	V	S	A	.	.	A	G	G	L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H	P	V
Query Conservation										.	.
Alig confidence										.	.																										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	G	X	A	G	Y	T	F	V	N	F	D	L	D	T	T	L	K	T	L	E	R	L	D	I	H	Y	L	C	I	K	D	F	H	.	.	.	.	L	P	L	N	S	T	D	E	Q	I	R	A	F	H	D	K	C	A	A	H	K	V	T	G	Y	A	V	G	P	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G	G	T	T	S												T	T								T	T	T	.	.	.	.	S		T	T																T	T										.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F	K	F	E	H
Query Conservation
Alig confidence		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	Y	X	K	S	E	E	E	I	D	R	A	F	D	Y	A	K	R	V	G	V	K	L	I	V	G	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	L	L	P	Y	V	D	K	K	V	K	E	Y	D	F	H	Y	A	I	H	L	H	G	P	D	I	K	T	Y	P	D	A	T
Template Known Secondary structure		.	.	.				S															T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G												T										T	T		S	S	S		S
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E	G	N	I	G
Query Conservation
Alig confidence												.																	.	.	.	.	.	.												.	.	.	.	.																.	.
Template Conservation												.																	.	.	.	.	.	.												.	.	.	.	.																.	.
Template Sequence		D	V	W	V	H	T	K	D	L	D	.	P	R	I	G	X	C	L	D	V	G	H	D	L	R	N	G	.	.	.	.	.	.	C	D	P	V	A	D	L	K	K	Y	H	.	.	.	.	.	T	R	V	F	D	X	H	I	K	D	V	T	D	S	S	.	.	K	A	G	V	G	I	E	I	G	R	G	K	I	D
Template Known Secondary structure								T	T	S		.	T	T													T	T	.	.	.	.	.	.											G	.	.	.	.	.	G	G										S		S	S	.	.	T	T						T	T	S	S	S
Template Predicted Secondary structure												.																	.	.	.	.	.	.												.	.	.	.	.																.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T
Query Conservation																											.	.	.	.	.
Alig confidence																	.										.	.	.	.	.
Template Conservation																	.
Template Sequence		F	P	A	L	I	R	X	X	R	E	V	N	Y	T	G	.	X	C	S	L	E	Y	E	K	D	X	K	D	P	F	L	G	I	A	E	S	I	G	Y	F	K	A	V	S	D
Template Known Secondary structure												T	T			S	.								S	S	T	T	S
Template Predicted Secondary structure																	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions