|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | A | N | A | A | I | R | A | A | E | I | D | A | T | A | F | A | L | F | T | K | N | Q | R | Q | W | R | A | A | P | L | T | T | Q | T | I | D | E | F | K | A | A | C | E | K | Y | . |
. |
H | Y | T | S | A | Q | I | L | P | H | D | S | Y | L | I | N | L | G | H | P | V | T | E | A | L | E | K | S | R | D | A |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |   | . | . | . |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
Template Sequence |   |
S | Y | A | R | L | I | K | R | Q | I | E | N | G | I | D | A | V | V | P | V | G | T | T | G | E | S | A | . |
. |
. |
T | L | T | H | E | E | H | R | T | C | I | E | I | A | V | E | T | C | K | G | T | K | V | K | V | L | A | G | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | N | A | T | H | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  | T | T | S | T | T | T | T | G | G | . | . | . | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | D | E | M | Q | R | C | E | Q | L | G | L | S | L | L | N | F | H | P | G | S | H | L | M | Q | I | S | E | E | D | C | L | A | R | I | A | E | S | I | N | I | A | L | D | K | T | Q | G | V | T | A | V | I | E | N | T | A | G | Q | G | S | N | L | G | F | K | F | E | H | L | A | A | I | I | D | G | V | E | D |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |
|   |   | . |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   | . |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | V | G | L | A | K | F | A | K | E | H | G | A | D | G | I | L | S | V | A | P | Y | Y | N | K | . |
P | T | Q | Q | G | L | Y | E | H | Y | K | A | . |
. |
. |
. |
. |
I | A | Q | S | V | D | I | P | V | L | L | Y | N | V | P | G | R | T | . |
G | C | E | I | S | T | D | T | I | I | K | L | F | R | D | C | E | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S | S |
| . |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
| S | S |
|  |  |  |  |
|
|  |  |  |  | . | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | R | V | G | V | C | I | D | T | C | H | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
I | Y | G | V | E | A | S | G | N | I | D | K | C |
Template Known Secondary structure |   |
 |  |  |
|
|
| S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |