Job Description P0A6C1 Confidence 100.00% Date Thu Jan 5 11:02:47 GMT 2012 Rank 12 Aligned Residues 245 % Identity 16% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		13	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure														.																																																			.	.	.	.
Query SS confidence														.																																																			.	.	.	.
Query Sequence		G	L	A	N	A	A	I	R	A	A	E	I	.	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	.	.	.	.	N	L	G	H	P	V	T	E	A	L	E	K	S
Query Conservation														.																																																			.	.	.	.
Alig confidence														.								.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	Y	V	D	L	.	.	.	.	.	.	.	.	P	Y	P	F	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I	T	P	E	I	Y	L	Q	K	W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	A
Template Known Secondary structure														S	S							.	.	.	.	.	.	.	.			S		S	T	T														T										T	T	S	G	G	G	T	T		S	T	T		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																												.	.	.	.																																							.	.
Query SS confidence																												.	.	.	.																																							.	.
Query Sequence		R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	.	.	.	.	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	.	.	S	N	L	G	F	K	F	E	H	L
Query Conservation																												.	.	.	.																																							.	.
Alig confidence																												.	.	.	.																																							.	.
Template Conservation
Template Sequence		F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P	D	V	K	F	A	I	E	Y	K	P	R	E	P	R	V	K	X	T	W	D	S	A	A	R	T
Template Known Secondary structure																T		S							T	T				S	S	T	T	S	S																			T		T	T	S								S		S	S	S	S			S	S		S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E	G	N	.	I	G
Query Conservation																																																																															.
Alig confidence										.																		.	.	.	.	.	.													.	.	.															.	.	.	.													.
Template Conservation										.																		.	.	.	.	.	.													.	.	.															.	.	.	.
Template Sequence		L	L	G	I	E	D	I	G	.	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	G	.	.	.	.	.	.	E	S	P	A	D	S	A	Q	L	I	I	D	.	.	.	R	G	R	L	F	G	X	D	V	N	D	N	L	R	.	.	.	.	G	W	D	D	D	L	V	V	G	T	V	H	X	T	E
Template Known Secondary structure									T	.		T	T													T	T	.	.	.	.	.	.													.	.	.	T	T							B		B			S	.	.	.	.	S	S				B		T	T	S	S
Template Predicted Secondary structure										.																		.	.	.	.	.	.													.	.	.															.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T
Query Conservation																											.	.	.	.	.
Alig confidence																	.										.	.	.	.	.
Template Conservation																	.
Template Sequence		I	F	E	F	F	Y	V	L	K	I	N	N	W	Q	G	.	V	W	Q	L	D	Q	F	P	F	R	E	N	H	V	E	A	A	Q	L	S	I	R	F	L	K	H	I	Y	R
Template Known Secondary structure												T	T				.									T	T	S
Template Predicted Secondary structure																	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions