Job Description P0A6C1 Confidence 100.00% Date Thu Jan 5 11:02:47 GMT 2012 Rank 15 Aligned Residues 255 % Identity 16% Template c3ju2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		M	K	Y	I	G	A	H	V	S	A	.	.	.	A	G	G	L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G
Query Conservation												.	.	.
Alig confidence												.	.	.																							.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.																													.	.	.	.
Template Sequence		V	E	G	L	S	I	N	L	A	T	I	R	E	Q	C	G	F	A	E	A	V	D	I	C	L	K	H	G	I	T	A	I	A	P	W	.	.	.	.	.	.	.	.	R	D	Q	V	A	A	I	G	L	G	E	A	G	R	I	V	R	A	N	G	L	K	L	T	G	L	C	R	.	.	.	.	G	G	F	F	P
Template Known Secondary structure			T	T					G	G	G	G	T	T	T													T	T							B	.	.	.	.	.	.	.	.																			T	T				S					.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.																													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.
Predicted Secondary structure																																						.																					.	.																	.	.	.
Query SS confidence																																						.																					.	.																	.	.	.
Query Sequence		H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	.	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	.	.	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	.	.	.	Q	G
Query Conservation																																						.																					.	.																	.	.	.
Alig confidence																																						.																					.	.																	.	.	.
Template Conservation
Template Sequence		A	P	D	A	S	G	R	E	K	A	I	D	D	N	R	R	A	V	D	E	A	A	E	L	G	A	D	C	L	V	L	V	A	G	G	L	P	G	G	S	K	N	I	D	A	A	R	R	M	V	V	E	G	I	A	A	V	L	P	H	A	R	A	A	G	V	P	L	A	I	E	P	L	H	P	M	Y	A	A	D
Template Known Secondary structure			S	S																						T	B	S							B				T	T																										T										G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H
Query Conservation
Alig confidence																				.	.																	.	.	.	.	.	.												.	.	.	.
Template Conservation																				.	.																	.	.	.	.	.	.												.	.	.	.
Template Sequence		R	A	C	V	N	T	L	G	Q	A	L	D	I	C	E	T	L	G	.	.	P	G	V	G	V	A	I	D	V	Y	H	V	W	W	D	P	.	.	.	.	.	.	D	L	A	N	Q	I	A	R	A	G	K	.	.	.	.	M	K	A	I	L	A	H	H	I	C	D	W	L	V	P	T	K	D	M	L	T	D	R
Template Known Secondary structure		T	B	S																.	.	T	T											T	T		T	.	.	.	.	.	.	T											.	.	.	.	T	T									B			S	S				S	S	S	B
Template Predicted Secondary structure																				.	.																	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	D	I	W	A	E	.	.	E	I	A	W	L	K	A	Q	Q	T
Query Conservation																																									.	.
Alig confidence																										.															.	.
Template Conservation																										.
Template Sequence		G	M	M	G	D	G	V	I	D	L	K	G	I	R	R	R	I	E	A	A	G	F	H	G	.	A	Q	E	V	E	I	F	S	A	D	N	W	W	K	R	P	A	D	E	V	I	A	T	C	V	E
Template Known Secondary structure		B		T	T	S	S	S													T	T				.								B	T	T	T	G	G	G	S
Template Predicted Secondary structure																										.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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