|   |
2 | . | . | . | . | . | . | . | 10 | |
. | . | |
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
| . |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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| . |
. |
. |
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Query Sequence |   |
K | Y | I | G | A | H | V | S | A | . |
A | G | . |
. |
. |
G | L | A | N | A | A | I | R | A | A | E | I | D | A | T | A | F | A | L | F | T | K | N | Q | R | Q | W | R | A | A | P | L | T | T | Q | T | I | D | E | F | K | A | A | C | E | K | Y | H | Y | T | S | A | Q | I | L | P | H | D | S | Y | L | I | N | L | G |
Query Conservation |   |
  |   |   |
|   |   |   |   |   | . |   |   | . | . | . |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
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| . |
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| . | . | . |
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| . | . |
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| . | . | . | . | . | . |
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|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |
Template Sequence |   |
X | K | Y | S | L | C | T | I | S | F | R | H | Q | L | I | S | F | T | D | I | V | Q | F | A | Y | E | N | G | F | E | G | I | E | L | W | G | T | H | A | Q | N | L | Y | X | Q | . |
. |
E | Y | E | T | T | E | R | E | L | N | C | L | K | D | K | T | L | E | I | T | X | I | S | D | . |
. |
. |
. |
. |
. |
Y | L | D |
Template Known Secondary structure |   |
|  |  |  |  |  | G | G | G | G | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|  |  |  |  |  |  |  |  |  |  | T | G | G | G | T |
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
| . | . | . | . | . | . |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
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|
70 | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
|
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Query SS confidence |   |
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Query Sequence |   |
H | P | V | T | E | A | L | E | K | S | R | D | A | F | I | D | E | M | Q | R | C | E | Q | L | G | L | S | L | L | N | F | H | P | G | S | H | L | M | Q | I | S | E | E | D | C | L | A | R | I | A | E | S | I | N | I | A | L | D | K | T | Q | G | V | T | A | V | I | E | N | T | A | G | Q | G | S | N | L | G | F | K |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
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| . |
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | S | L | S | A | D | F | E | K | T | I | E | K | C | E | Q | L | A | I | L | A | N | W | F | K | T | N | K | I | R | T | F | A | G | Q | K | G | S | A | D | F | S | Q | Q | E | R | Q | E | Y | V | N | R | I | R | X | I | C | E | L | F | A | Q | H | N | X | Y | V | . |
L | L | E | T | H | P | N | T | L | T | D | T |
Template Known Secondary structure |   |
| S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| S |
| S | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  | . |  |  |  |
|
| T | T | S | T | T | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
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  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
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|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
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|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
F | E | H | L | A | A | I | I | D | G | V | E | D | K | S | R | V | G | V | C | I | D | T | C | H | A | F | A | A | G | Y | D | L | R | T | P | A | E | C | E | K | T | F | A | D | F | A | R | T | V | G | F | K | Y | L | R | G | M | H | L | N | D | A | K | S | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
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|
| . |
|
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| . | . | . | . | . | . |
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| . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | P | S | T | L | E | L | L | G | E | V | D | . |
H | P | N | L | K | I | N | L | D | F | L | H | I | W | E | S | G | . |
. |
. |
. |
. |
. |
A | D | P | V | D | S | F | Q | Q | L | R | . |
. |
. |
. |
. |
P | W | I | Q | H | Y | H | F | K | N | I | S | S | A | D | Y | L | H | V | F | E | P | N | N | V | Y | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  | G | . | . | . | . | . | G | G |  |  |  |  |  |  |
|  |  | S |
| G | G | G | G | G | G | G | S |  |  |  |  |  | S | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
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|
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|
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|
|  |  |
Template SS confidence |   |
|
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  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
|
|
. | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
| . |
. |
. |
|
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|
|
|
Query Sequence |   |
G | S | R | V | D | R | H | H | S | L | G | E | G | N | I | G | H | D | A | F | R | W | I | M | Q | D | D | R | F | D | G | I | P | L | I | L | E | T | I | N | P | . |
. |
. |
D | I | W | A | E | E | I | A | W | L | K | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
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|
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| . | . |
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| . |
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|
| . | . | . |
|
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|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   | . | . |
|
|   |
| . |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
A | G | N | R | T | G | X | V | P | L | F | E | G | I | V | N | Y | D | E | I | I | Q | E | V | R | . |
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D | T | D | H | . |
F | A | S | L | E | W | F | G | H | N | A | K | D | I | L | K | A | E | X | K | V | L | T | N |
Template Known Secondary structure |   |
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| G | G | G | S | S | S |
|  |  |  |  |  |  |  |  | T | . | . | T | S | S |
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| S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
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. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
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