Job Description P0A6C1 Confidence 99.03% Date Thu Jan 5 11:02:47 GMT 2012 Rank 41 Aligned Residues 221 % Identity 16% Template c3bwwA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:protein of unknown function duf692/cog3220; PDBTitle: crystal structure of a duf692 family protein (hs_1138) from2 haemophilus somnus 129pt at 2.20 a resolution Resolution 2.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D
Query Conservation
Alig confidence																										.	.	.	.	.																									.	.	.	.	.	.													.	.	.	.
Template Conservation																										.	.	.	.	.																									.	.	.	.	.	.													.	.	.	.
Template Sequence		A	E	G	F	L	Q	L	R	N	N	D	R	I	Q	F	X	E	I	A	P	E	N	W	I	.	.	.	.	.	K	X	G	G	F	A	R	Y	Q	F	D	K	V	A	E	K	I	P	I	L	I	H	G	L	.	.	.	.	.	.	S	L	S	L	G	G	Q	A	P	L	D	K	.	.	.	.	E	L	L	S	S
Template Known Secondary structure									S	S	S	S	S	S												.	.	.	.	.	T													T	T	T	S					B		S	.	.	.	.	.	.				T	T		S	S					.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.																									.	.	.	.	.	.													.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F	K	.	.	.	F	E	H	L	A	A	I	I	D	G	V	E	D
Query Conservation																																																																		.	.	.
Alig confidence																																														.																				.	.	.													.
Template Conservation																																														.																																			.
Template Sequence		I	K	A	X	I	K	Q	Y	N	T	P	F	F	S	D	H	L	S	F	L	L	P	X	P	F	T	D	E	A	V	K	H	T	A	A	R	I	R	E	V	Q	D	F	L	.	E	I	Q	I	S	V	E	N	T	S	Y	Y	L	H	S	E	T	S	T	X	N	E	V	E	F	L	N	A	I	V	Q	E	A	N	.
Template Known Secondary structure									T	T								S						B																						.	T	S										S		B		T	T		S	S														T	.
Template Predicted Secondary structure																																														.																																			.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	.	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q
Query Conservation																									.
Alig confidence		.	.	.																.	.				.												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																.	.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	C	G	I	H	L	D	V	N	N	I	Y	V	N	A	V	.	.	N	H	G	L	L	D	P	H	V	F	I	D	N	V	D	.	.	.	.	L	K	R	V	N	Y	I	H	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	W	D	L	L	E
Template Known Secondary structure		.	.	.																.	.					S									S		.	.	.	.	G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																.	.																.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					166	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.																								.	.	.	210	.	.	.
		250	.			.	.	.	.		.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure				.	.					.							.
Query SS confidence				.	.					.							.
Query Sequence		D	D	.	.	R	F	D	G	.	I	P	L	I	L	E	.	T	I	N	P	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A
Query Conservation				.	.					.							.
Alig confidence				.	.					.							.
Template Conservation
Template Sequence		Y	T	Y	A	R	L	S	H	X	P	P	T	L	L	E	R	F	P	P	F	E	K	L	C	K	E	V	D	I	I	H	Q	L	Q	Q	K	Y	V
Template Known Secondary structure					T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions