Job Description P0A6C1 Confidence 99.91% Date Thu Jan 5 11:02:47 GMT 2012 Rank 34 Aligned Residues 248 % Identity 14% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		18	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure									.																																																		.
Query SS confidence									.																																																		.
Query Sequence		A	I	R	A	A	E	I	.	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	.	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M
Query Conservation									.																																																		.
Alig confidence									.														.	.																																			.								.	.	.
Template Conservation																							.	.																																											.	.	.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	P	.	.	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	.	.	.	R	D	A	L	I	E	N	Y	K	T	S	I
Template Known Secondary structure							T	S	T	T										S	S		.	.	T	T	S																	T	T																		T		T	T	.	.	.
Template Predicted Secondary structure																							.	.																																											.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																																							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	.	.	L	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A
Template Known Secondary structure								T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	.	.	.	.	.	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																			.																.	.	.	.	.													.	.	.
Template Conservation																																												.																.	.	.	.	.													.	.	.
Template Sequence		E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	.	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	.	.	.	.	.	N	D	V	L	A	M	T	E	Y	A	L	K	.	.	.	R	N
Template Known Secondary structure					T									S	S	S	S			T	T							S									T	T	S		S	T	T	.											T	T	S	T	T	.	.	.	.	.													.	.	.		T
Template Predicted Secondary structure																																												.																.	.	.	.	.													.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.				.	280
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.										.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.												.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.												.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	R	H	H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	.	.	.	.	E	T	I	N	P	D	I	W	A	E	E	.	.	.	.	.	.	.	.	.	I	A	W	L	K	A
Query Conservation																																																				.	.	.	.												.	.	.	.	.	.	.	.	.
Alig confidence																																															.					.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		R	I	N	F	M	H	T	R	N	V	T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	.	S	L	R	P	D	H	G	R	R	I	W	G	D	Q	T	K	T	P	G	Y	G	L	Y	D	R	A	L	G	A	T	Y	F	N	G
Template Known Secondary structure															T	T							S	S	G	G	G	S	S													T	T				.									B		T	T					S	T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		278	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions