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Job DescriptionP0A6C1
Confidence100.00%DateThu Jan 5 11:02:47 GMT 2012
Rank4Aligned Residues266
% Identity35%Templatec3aamA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  KYIGAHVSAAG. . GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHP
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Template Sequence  PRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAV. . IHASYLVNLGA.
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Query Sequence  VTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFE
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Template Sequence  EGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRL. . . . . AGVRSRPVLLVENTAGGGEKVGARFE
Template Known Secondary structure  SSTT




BS
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Query Sequence  HLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNI
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Template Sequence  ELAWLV. . . . ADTPLQVCLDTCHAYAAGYDVA. . EDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGKI
Template Known Secondary structure  ....TTSS
T

TT..T
T
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Query Sequence  GHDAFRWIMQDDRFDGIPLILET. INPDIWAEEIAWLKAQQTEK
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Template Sequence  GEG. LKRVFLDPRLKDRVFILETPRGPEEDAWNLRVFRAWLEEA
Template Known Secondary structure  TT.T
GGGTTS
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STT
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   228.230 .........240.........250.........260.........270
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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